DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir10a and Ir40a

DIOPT Version :9

Sequence 1:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster


Alignment Length:744 Identity:152/744 - (20%)
Similarity:271/744 - (36%) Gaps:202/744 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLFMLDLKTLNLTRLNGL----------LVEPTRDLPQ-----LELWLRAGSDH--QDAENPYVQ 56
            |.::|.|  ||.|||..:          |.:..|.|.|     |.|...|.||.  |...|.|:.
  Fly    10 LPYLLGL--LNSTRLTFIGNDESDTAIALTQIVRGLQQSSLAILALPSLALSDGVCQKERNVYLD 72

  Fly    57 WFLLRTEIP--LSIVTYQENRYW--MDDPFGRRNLVLVMSLD---QLLTNRGAAAPIQKASTF-F 113
            .||.|....  .|:|..|...::  :::.....|..:.:.||   |||.:........:.|.| |
  Fly    73 DFLQRLHRSNYKSVVFSQTELFFQHIEENLQGANECISLILDEPNQLLNSLHDRHLGHRLSLFIF 137

  Fly   114 YILA---DQDKDLSADEQLRLEGSCRQLWTQHKVYNRFFLTRDGVWIYDPFKRRDSAFGRLVRYY 175
            |..|   ...:.:...|.||:....|......::|            |:..:....:..:||.:|
  Fly   138 YWGARWPPSSRVIRFREPLRVVVVTRPRKKAFRIY------------YNQARPCSDSQLQLVNWY 190

  Fly   176 GSETLD----KLL------FRDMAGYPLRIQMFRS------VYTRPEF--DKETGLL-------T 215
            ..:.|.    .||      :.:..|...|:.:|.|      .|....|  |:|...|       .
  Fly   191 DGDNLGLQRIPLLPTALSVYANFKGRTFRVPVFHSPPWFWVTYCNNSFEEDEEFNSLDSIEKRKV 255

  Fly   216 RVT-GVDFLVAQMLRERLNFTM-LLQQPEKKYFGERS-----ANGSYNGAIGSIIKDGLDICLTG 273
            ||| |.|..:..:|.:.:||.. .::.|.:.....||     :|.|:.|.||.:.....|     
  Fly   256 RVTGGRDHRLLMLLSKHMNFRFKYIEAPGRTQGSMRSEDGKDSNDSFTGGIGLLQSGQAD----- 315

  Fly   274 FFVKDYLVQ-------QYMDFTVAVYDDELCIYVPKASRIPQSILPIFAVGYDIWLGFVLT---- 327
            ||:.|..:.       ::..||:| .......:.|:  |:.:::..:.....|||...:||    
  Fly   316 FFLGDVGLSWERRKAIEFSFFTLA-DSGAFATHAPR--RLNEALAIMRPFKQDIWPHLILTIIFS 377

  Fly   328 ------AFACALIW------------------------LTLRVINLKLRIVSLGNQ--HIVGQAL 360
                  ..|...||                        :|.|::.||.|.|...:|  |.:.|. 
  Fly   378 GPIFYGIIALPYIWRRRWANSDVEHLGELYIHMTYLKEITPRLLKLKPRTVLSAHQMPHQLFQK- 441

  Fly   361 GIMVDTWVVWVRLNL------SHLPASY-AERMFIGTLCLVSVIFGAIFESSLATVYIHPLYYKD 418
                   .:|..|.|      :.|...| |:.:.|......:.:...::.:.|.:.:..|.....
  Fly   442 -------CIWFTLRLFLKQSCNELHNGYRAKFLTIVYWIAATYVLADVYSAQLTSQFARPAREPP 499

  Fly   419 INTMQELD----ESGLKVVYKYSSMADDLFFSETS---PLFASLNKKLSWNRDLRADVIDEVARF 476
            |||:|.|.    ..|.::..:..|.:.::..:.|.   .|:|.:.:::.  .|.:...||.|   
  Fly   500 INTLQRLQAAMIHDGYRLYVEKESSSLEMLENGTELFRQLYALMRQQVI--NDPQGFFIDSV--- 559

  Fly   477 RNKAGVSRYTSLILE----------------------SSHFTLLRKIWVVPECPKYYTISYVMPR 519
              :||:    .||.|                      |::|.|.:|::.     :|..::..:  
  Fly   560 --EAGI----KLIAEGGEDKAVLGGRETLFFNVQQYGSNNFQLSQKLYT-----RYSAVAVQI-- 611

  Fly   520 DSPWEDAVNALLLRFLNAGLIVKWIQDE--KSWVDIK----MRSNILEADAE---------SELV 569
            ..|:..::|.:|::...:|::.|....|  |.:.:::    .:.::...::|         |.::
  Fly   612 GCPFLGSLNNVLMQLFESGILDKMTAAEYAKQYQEVEATRIYKGSVQAKNSEAYSRTESYDSTVI 676

  Fly   570 RVLTIGDLQLAFYVVIGGNLLAFLGFLAE 598
            ..|.:..||.||..:..|:|.|.:..|.|
  Fly   677 SPLNLRMLQGAFIALGVGSLAAGVILLLE 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:304360 19/86 (22%)
TM_PBP1_branched-chain-AA_like 315..>411 CDD:294309 25/138 (18%)
Lig_chan 319..587 CDD:278489 64/354 (18%)
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 29/126 (23%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 20/101 (20%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 29/158 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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