DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir10a and GRIN2C

DIOPT Version :10

Sequence 1:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:600 Species:Drosophila melanogaster
Sequence 2:XP_054171851.1 Gene:GRIN2C / 2905 HGNCID:4587 Length:1265 Species:Homo sapiens


Alignment Length:662 Identity:134/662 - (20%)
Similarity:223/662 - (33%) Gaps:220/662 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GLLVEPTR---DLPQLELWLRAGS-DHQDAENPYVQWFLLRTEIP-------LSIVTYQENRYWM 78
            |.||:||.   .|.:..||...|. :|......|..|......:.       |::.|.:|.    
Human   351 GYLVQPTMVVIALNRHRLWEMVGRWEHGVLYMKYPVWPRYSASLQPVVDSRHLTVATLEER---- 411

  Fly    79 DDPFGRRNLVLVMSLDQLLTNRGAAAP------IQKASTFFYILADQDKDLSADEQLRLEGSC-- 135
              ||     |:|.|.|   ...|...|      .|...||      ...|::...:|..:|.|  
Human   412 --PF-----VIVESPD---PGTGGCVPNTVPCRRQSNHTF------SSGDVAPYTKLCCKGFCID 460

  Fly   136 --RQLWTQHKV-YNRFFLTRD-------GVW------IYDPFKRRDSAFGRL-VRYYGSETLDKL 183
              ::|....|. |:.:.:|..       |||      :|  :||.|.|.|.| :....||.:|  
Human   461 ILKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVY--YKRADMAIGSLTINEERSEIVD-- 521

  Fly   184 LFRDMAGYPLRIQMFRSVYTRPEFDKETGLLTRVTGVDFLVAQMLRERLNFTMLLQQPEKKYFGE 248
                              ::.|..:         ||:..:||:                      
Human   522 ------------------FSVPFVE---------TGISVMVAR---------------------- 537

  Fly   249 RSANGS---------YNGAIGSIIKDGLDICLTGFFVKDYLVQQYMDFTVAVYDDELCIYVPKAS 304
              :||:         |:.|:..::   ..:|||...:..::.:.   |:...|:..|       :
Human   538 --SNGTVSPSAFLEPYSPAVWVMM---FVMCLTVVAITVFMFEY---FSPVSYNQNL-------T 587

  Fly   305 RIPQSILPIFAVGYDIWLGFVLTAFACALIWLTLRVINLKLRIVSLGNQHIVGQALGIMVDTWVV 369
            |..:|..|.|.:|..:|           |:|..  |.|..:.|     ::..|....|||..|..
Human   588 RGKKSGGPAFTIGKSVW-----------LLWAL--VFNNSVPI-----ENPRGTTSKIMVLVWAF 634

  Fly   370 WVRLNLSHLPASYAERMFIGTLCLVSVIFGAIFESSLATVYIHPLYYKDINTMQE-----LDESG 429
            :                        :|||.|.:.::||...|...|...::.:.:     |:.:|
Human   635 F------------------------AVIFLASYTANLAAFMIQEQYIDTVSGLSDKKSLHLENTG 675

  Fly   430 LKVVYKYSSMADDLF---FSETSPLFASLNKKLSWNRDLRA---DVIDEVARFRNKAGVSRYTSL 488
            :... .:.:...|.|   ..:..|.........|..|::|:   |:...:.:|..::.....|||
Human   676 VAWT-AFKTFCSDYFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHTHMVKFNQRSVEDALTSL 739

  Fly   489 ILESSHFTLLRKIWVV-------------PECPKYYTI-----------SYVMPRDSPWEDAVNA 529
            .:.|....:.||:...             .|..|..||           ...|.:||.|:.|::.
Human   740 KMGSEAQPVPRKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDL 804

  Fly   530 LLLRFLNAGLIVKWIQDEKSWVDIKMRSNILEADAESELVRVLTIGDLQLAFYVVIGGNLLAFLG 594
            .||:||..|...|.   |..|:     |.|.:.:....:...|.|.::...||:::....||.|.
Human   805 ALLQFLGDGETQKL---ETVWL-----SGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLV 861

  Fly   595 FLAEHF-RWKLQ 605
            |..||. .|||:
Human   862 FAWEHLVYWKLR 873

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:473866 11/82 (13%)
GRIN2CXP_054171851.1 PBP1_iGluR_NMDA_NR2 28..384 CDD:380601 10/32 (31%)
PBP2_iGluR_NMDA_Nr2 400..829 CDD:270436 109/567 (19%)
NMDAR2_C 866..>941 CDD:463148 4/8 (50%)

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