DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir10a and GRIN2A

DIOPT Version :10

Sequence 1:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:600 Species:Drosophila melanogaster
Sequence 2:XP_016878661.1 Gene:GRIN2A / 2903 HGNCID:4585 Length:1516 Species:Homo sapiens


Alignment Length:695 Identity:127/695 - (18%)
Similarity:238/695 - (34%) Gaps:183/695 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLFMLDLKTLNLTRLNGLLVEPTRDLPQLELWLRAGSDHQDAENPYVQWFLLRTEIP--LSIVTY 71
            :|.:.:.::|.||..:...:.|:         |.:|:..           |:..|.|  |..|:|
Human   289 VLILSEARSLGLTGYDFFWIVPS---------LVSGNTE-----------LIPKEFPSGLISVSY 333

  Fly    72 QENRYWMD----DPFGRRNLVLVMSLDQLLTNRGAAAPIQKASTF---------------FYILA 117
            .:..|.::    |..|    :|..:...:| .:.:..|..|||.:               |.:..
Human   334 DDWDYSLEARVRDGIG----ILTTAASSML-EKFSYIPEAKASCYGQMERPEVPMHTLHPFMVNV 393

  Fly   118 DQD-KDLSADEQLRLEGSCRQLWTQHKVYNR---FFLTRD------GVWIYDPFKRRDSAFGRLV 172
            ..| ||||..|    ||        ::|:.|   ..|.:|      |.|.......|.:.:.|..
Human   394 TWDGKDLSFTE----EG--------YQVHPRLVVIVLNKDREWEKVGKWENHTLSLRHAVWPRYK 446

  Fly   173 RYYGSE---------TLDK---LLFRDMAGYPLRIQMFRSVYTRPEFDK-----ETGLLTR--VT 218
            .:...|         ||::   ::..|:.  ||.....|:.....:|.|     ..|:..:  ..
Human   447 SFSDCEPDDNHLSIVTLEEAPFVIVEDID--PLTETCVRNTVPCRKFVKINNSTNEGMNVKKCCK 509

  Fly   219 GVDFLVAQMLRERLNFTMLLQQPEKKYFGERSANGSYNGAIGSIIKDGLDICLTGFFVKDYLVQQ 283
            |....:.:.|...:.||..|........|:: .|..:||.||.::.....:.:....:.:.. .:
Human   510 GFCIDILKKLSRTVKFTYDLYLVTNGKHGKK-VNNVWNGMIGEVVYQRAVMAVGSLTINEER-SE 572

  Fly   284 YMDFTVAVYDDELCIYVPKASRI--PQSILPIFAVGYDIW-LGFVLTAFACALIWLTLRVI---- 341
            .:||:|...:..:.:.|.:::..  |.:.|..|:.  .:| :.||:.....|:........    
Human   573 VVDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSA--SVWVMMFVMLLIVSAIAVFVFEYFSPVG 635

  Fly   342 ---NLKLRIVSLGNQHIVGQALGIMVDTWVVW-VRLNLS---HLPASYAERMFIGTLCLVSVIFG 399
               ||.......|....:|:|:      |::| :..|.|   ..|.....::.:......:|||.
Human   636 YNRNLAKGKAPHGPSFTIGKAI------WLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFL 694

  Fly   400 AIFESSLATVYIHPLYYKDINTMQE---------------------LDESGLKVVYKY------- 436
            |.:.::||...|...:...:..:.:                     ..|..::..|.|       
Human   695 ASYTANLAAFMIQEEFVDQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERNIRNNYPYMHQYMTK 759

  Fly   437 ---SSMADDLFFSETSPLFASLNKKLSWNRDLRADVIDEVARFRNKAGVSRYTSLILESSHFTLL 498
               ..:.|.|...:|..|.|               .|.:.|....|||......|:...|.:.  
Human   760 FNQKGVEDALVSLKTGKLDA---------------FIYDAAVLNYKAGRDEGCKLVTIGSGYI-- 807

  Fly   499 RKIWVVPECPKYYTISY--VMPRDSPWEDAVNALLLRFLNAGLIVKWIQDEKSWVDIKMRSNILE 561
                       :.|..|  .:.:.|||:..::..||:|:..|   :..:.|..|:     :.|..
Human   808 -----------FATTGYGIALQKGSPWKRQIDLALLQFVGDG---EMEELETLWL-----TGICH 853

  Fly   562 ADAESELVRVLTIGDLQLAFYVVIGGNLLAFLGFLAEH-FRWKLQ 605
            .:....:...|.|.::...||::.....|:.:.|:.|| |.|||:
Human   854 NEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFIWEHLFYWKLR 898

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:473866 13/73 (18%)
GRIN2AXP_016878661.1 PBP1_iGluR_NMDA_NR2 84..439 CDD:380601 37/186 (20%)
PBP2_iGluR_NMDA_Nr2 455..854 CDD:270436 75/446 (17%)
NMDAR2_C 891..1516 CDD:463148 5/8 (63%)

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