DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir10a and GRIK3

DIOPT Version :10

Sequence 1:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_000822.2 Gene:GRIK3 / 2899 HGNCID:4581 Length:919 Species:Homo sapiens


Alignment Length:705 Identity:132/705 - (18%)
Similarity:234/705 - (33%) Gaps:219/705 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TVFLLFMLDLKT-----LNLTRLNGLLV--------------EPTRDLPQLELWLRAGSDHQDAE 51
            |...|:.|||:.     :|||....|.|              |..:..|:.|..|..|....||.
Human   260 TTLDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAPRSESGLLDGVMMTDAA 324

  Fly    52 NPYVQWFLLRTEIPLSIVTYQ-------------ENRYWMDDPFGRRNLVLVMSLD-QLLTNRGA 102
                   ||...:.:..|.||             .::.|.   ||.|.:..:.... :.||.|  
Human   325 -------LLYDAVHIVSVCYQRAPQMTVNSLQCHRHKAWR---FGGRFMNFIKEAQWEGLTGR-- 377

  Fly   103 AAPIQKASTFFYILADQDKDLSADEQLRLEGSCRQLWTQHKVYNRFFLTRDGVWI-YDPFKRRDS 166
             ....|.|.   :..|.|.|:.:   |:.:|                |.:.|||. .|.....:.
Human   378 -IVFNKTSG---LRTDFDLDIIS---LKEDG----------------LEKVGVWSPADGLNITEV 419

  Fly   167 AFGRLVRYYGSETLDKLLFRDMAGYPLRIQMF-------RSVYTRPEFDKETGLLTRVTGVDFLV 224
            |.||     |....|.|..|.:....:..:.|       |::|....|:...        :|.| 
Human   420 AKGR-----GPNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLYGNDRFEGYC--------IDLL- 470

  Fly   225 AQMLRERLNFTMLLQQPEKKYFGERSANGSYNGAIGSIIKDGLDICLTGFFVKDYLVQQYMDFTV 289
             :.|...|.|:..::..|...:|.:...|.:||.:..:|....|:.:....: .::.::.:||:.
Human   471 -KELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTI-THVREKAIDFSK 533

  Fly   290 AVYDDELCIYVPKASRIPQSILPIF-AVGYDIWLGFVLTAF---ACALI---------WLTLRVI 341
            ......:.|...|.:....|:.... .:..|||: :||.|:   :|.|.         |......
Human   534 PFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWM-YVLLAYLGVSCVLFVIARFSPYEWYDAHPC 597

  Fly   342 NLKLRIVS----------LGNQHIVGQALGIMVDTWVVWVRLNLSHLPASYAERMFIGTLCLVSV 396
            |....:|.          .|...::.|...:|               |.:.:.|:..|.....::
Human   598 NPGSEVVENNFTLLNSFWFGMGSLMQQGSELM---------------PKALSTRIIGGIWWFFTL 647

  Fly   397 IFGAIFESSLATVYIHPLYYKDINTMQ----ELDESGLKVVYKYSSMADD---LFFSET-----S 449
            |..:.:.::||.       :..:..|:    ..|:...:...:|.::.|.   .||.::     .
Human   648 IIISSYTANLAA-------FLTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFE 705

  Fly   450 PLFASLNKKLSWNRDLRADVIDEVARFRNKAGVSRYT----SLILESSHFTLLRKIWVVPECPKY 510
            .::|.::.|.|            .....|:.|:.|..    :|::||:                 
Human   706 KMWAFMSSKPS------------ALVKNNEEGIQRALTADYALLMEST----------------- 741

  Fly   511 YTISYV----------------------MPRDSPWEDAVNALLLRFLNAGLIVKWIQDEKSWVDI 553
             ||.||                      .|..||:.|.:...:|:......:  .|..||.|   
Human   742 -TIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKL--HIMKEKWW--- 800

  Fly   554 KMRSNIL--EADAESELVRVLTIGDLQLAFYVVIGGNLLAFLGFLAEHFRWKLQK 606
              |.:..  |.:.|:..:.:..||.:   |.|:..|.:|:.|..:.| |.:||:|
Human   801 --RGSGCPEEENKEASALGIQKIGGI---FIVLAAGLVLSVLVAVGE-FVYKLRK 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:473866 14/73 (19%)
GRIK3NP_000822.2 PBP1_iGluR_Kainate 37..417 CDD:380605 41/191 (21%)
PBP2_iGluR_Kainate_GluR7 433..801 CDD:270441 70/438 (16%)

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