DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir10a and Ir41a

DIOPT Version :9

Sequence 1:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_995744.4 Gene:Ir41a / 2768714 FlyBaseID:FBgn0040849 Length:648 Species:Drosophila melanogaster


Alignment Length:664 Identity:128/664 - (19%)
Similarity:238/664 - (35%) Gaps:203/664 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 IPLSIVTYQEN--RYWMDDPFGRRNLV-LVMSLDQLLTNRGAAAPIQKASTFFYILADQDKDLSA 125
            :.::|.::.:|  .|.:|....::.|. ..:.||:|:.....:..:....||...    |||:..
  Fly    46 VGINIKSFDDNGGHYIIDTGLKKKELQNKHLFLDELVIKIIISIEVTHCETFVVF----DKDIDR 106

  Fly   126 DEQLRLEGSCRQLWTQHKVYNRFFL---------TRDGVWIYDP---FKRRD----SAF------ 168
            ......:.|...:|  ..::|:|..         :|:..:...|   |..||    |:|      
  Fly   107 FVNAFNKASVYSIW--RSLHNKFVFAHIANESPESRNHFFEDQPNILFVVRDHSSASSFDIKTNK 169

  Fly   169 --GR---------LV-RYYGSE---TLDKLLFRD-----------MAG--YP----LRIQM---- 197
              ||         || ||..||   ...|.||.|           :||  ||    ::..|    
  Fly   170 FVGRKAENPSQMILVDRYLASEQRFQFGKSLFADKLNNLQGREVIIAGFDYPPYTVIKHNMSTNA 234

  Fly   198 ----------FRSVYTRPEFDKETGLLTRVTGVDFLVAQMLRERLNFTMLLQQPEKKYFGERSAN 252
                      |::||              :.|.:..:.....|:.|.|:.:.......:|:...|
  Fly   235 QDMGVSGESDFKNVY--------------IDGTETRIVLNFCEQFNCTIQIDSSAANDWGKVYPN 285

  Fly   253 GSYNGAIGSIIKDGLDICLTGFF--VKDYLVQQYMDFTVAVYDDELCIYVPKASRIPQSILPIFA 315
            .|.:||:|.:|....|||:...:  .:||   .|:|.::.:....:...||...|:....||:..
  Fly   286 MSGDGALGMLINRKADICIGAMYSWYEDY---TYLDLSMYLVRSGITCLVPAPLRLTSWYLPLEP 347

  Fly   316 VGYDIWLGFVLTAFACALIWLTLRVINLKLRIVSLGNQHIVGQALGIMV---DTWVVWV------ 371
            ....:|        |..|:.|......|.|...|       .|||.::.   :.|  |.      
  Fly   348 FKETLW--------AAILLCLCAEATGLVLAYKS-------EQALYVLPGYREGW--WTCTSFGV 395

  Fly   372 ----RLNLSHLPASYAERMFIGTL---CLVS-VIFGAIFESSLATVYIHPLYYKDINTMQEL--- 425
                :|.:|....|.|..:.:..|   |.:: :|..:|:...||::...|...:..:|:..|   
  Fly   396 CTTFKLFISQSGNSKAYSLTVRVLLFACFLNDLIITSIYGGGLASILTIPSMDEAADTVTRLRFH 460

  Fly   426 ------------------DESGLK-VVYKYSSMADDLFFSETSPLFASLNKKLSWNRDLRADVID 471
                              ||:.:| ::|.:...:||...            :|:.::.:|.....
  Fly   461 RLQWAANSEAWVSAIRASDEALVKDILYNFHIYSDDELL------------RLAQDQHMRIGFTV 513

  Fly   472 EVARF-----RNKAGVSRYTSLIL--ESSHFTLLRKIWVVPECPKYYTISYVMPRDSPWEDAVNA 529
            |...|     .|..|......|::  :..:|              .||:::| ||..|..|.:|.
  Fly   514 ERLPFGHFAIGNYLGPQAIDQLVIMKDDIYF--------------QYTVAFV-PRLWPLLDKLNT 563

  Fly   530 LLLRFLNAGLIVKWIQDEKSW--------VDIKMRSNILEADAESELVRVLTIGDLQLAFYVVIG 586
            |:..:.::|.       :|.|        :::|::..:.|....::.:..:.:|....|.::::.
  Fly   564 LIYSWHSSGF-------DKYWEYRVVADNLNLKIQQQVQETMTGTKDIGPVPLGMSNFAGFIIVW 621

  Fly   587 --GNLLAFLGFLAE 598
              |:.:|.|.||.|
  Fly   622 ILGSAIATLTFLLE 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:304360 17/75 (23%)
TM_PBP1_branched-chain-AA_like 315..>411 CDD:294309 22/112 (20%)
Lig_chan 319..587 CDD:278489 55/323 (17%)
Ir41aNP_995744.4 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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