DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir10a and Ir52b

DIOPT Version :9

Sequence 1:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_725469.2 Gene:Ir52b / 246631 FlyBaseID:FBgn0050469 Length:596 Species:Drosophila melanogaster


Alignment Length:684 Identity:127/684 - (18%)
Similarity:237/684 - (34%) Gaps:199/684 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FLLFM----LDLKTLNLTRLNGLLVEPTRDLPQLELW---LRAGSD---HQDAENPYVQWFLLRT 62
            ||.:|    .|:...|.:.::..|:.....|...|.:   |..|.|   |...:|         .
  Fly    10 FLGYMAAHIADISVQNQSLMDNELINLLLKLRNEEFYDTLLVYGKDCEFHSVIKN---------V 65

  Fly    63 EIPLSIVTYQENRYWMDDPFGRRNLVLVMSLDQLLTNRGAAAPIQKASTFFYILADQDKDLSADE 127
            ::.:.:|:...|..|     ...:|.|::|....:.|.|..:...|       |....:.:...|
  Fly    66 DVAVVLVSDSMNFEW-----NFSSLTLILSCGPDIDNGGPNSTSIK-------LQRNRRLVLLKE 118

  Fly   128 QLRLEGSCRQLWTQHKVYNRFFLTRDGVWIYDPFKRRDSAFGRLVRYYGSETLDKL--------- 183
            ..:....| .::||.:.|| ..|.|:.      |.:..|.:  ..||:....:|::         
  Fly   119 DFQPSNIC-NIYTQKEQYN-IALVREN------FTKSKSIY--TCRYFQDPNVDEVNLSGTKPIF 173

  Fly   184 --LFRDMAG---------YPLRIQMFRSVYTRPEFDKETGLLTRVTGVDFLVAQMLRERLNFTML 237
              .|::|.|         .|.|:.:::        |...|.|..:..|..|:.. ..:::|.|:.
  Fly   174 IEQFQNMKGKAIRIVPDLLPPRVMLYQ--------DANDGELKMIGYVANLITN-FAQKVNATLQ 229

  Fly   238 LQQPEKKYFGERSANGSYNGAIGSIIKDG-LDICLT-------------GFFVKDYLVQQYMDFT 288
            |.      |.:.|.:.:   .|..:.||. ||:.:|             .:   .||:..|    
  Fly   230 LD------FLKPSTSIT---EISRMAKDDELDMGITLEASLNTSNLETSSY---PYLLTSY---- 278

  Fly   289 VAVYDDELCIYVPKASRIPQSILPIFAVGYD-IWLGF---------VLTAFACALIWLTLRVINL 343
                    |:.|...::.|.::  ::|:..| :.||.         ||..::..:.|..|.|.|:
  Fly   279 --------CLMVQVPAKFPYNL--VYALIVDPLVLGIIFVLFLLLSVLLIYSQKMSWQDLSVANI 333

  Fly   344 KLRIVSLGNQHIVGQALGIMVDTWVVWVRLNLSHLPASYAERMFIGTLCLVSVIFGAIFESSLAT 408
            .|...||  :.::||:...              .|.||...|:....||..|::...::|:.|.:
  Fly   334 LLNDKSL--RGLLGQSFPF--------------PLNASKKLRLIFTILCFASIMLTTMYEAYLQS 382

  Fly   409 VYIHP------LYYKDINT------MQELDESGLKVVYKYSS-----MADDLFFSETSPLFASLN 456
            .:.:|      ..::|:.:      |..|:.:||  :...:|     ..|||...:..|....|.
  Fly   383 FFTNPPSEPEICSFQDVGSYNRRIAMSALEVNGL--IKTNNSHFREIRMDDLEIFDNMPECYELR 445

  Fly   457 K--KLSWNRDLRADVIDEVARFRNKAGVSRYTSLILESSHFTLLRKIWVVPECPKYY-------- 511
            .  .||:|..:..|      |:|:.|            ...||.::       |.:|        
  Fly   446 DAFNLSYNYVVTGD------RWRSYA------------EQQTLFKE-------PVFYFARDLCFS 485

  Fly   512 ---TISYVMPRDSPWEDAVNALLLRFLNAGLIVKWIQDEKSWVDIKMRSNILEADAESELVRV-- 571
               .:|..:.|..|:....:..:::....|.:..|:  ..|:.|:.........|....|...  
  Fly   486 RLIFLSVPLRRHLPYRHLFDEHMMQQHEFGFVNYWM--SHSFFDMVRLGLTSLKDLSRPLAYTPS 548

  Fly   572 LTIGDLQLAFYVVIGGNLLAFLGFLAE--HFRWK 603
            |.:.|:.....:.:...:|....||.|  ..:||
  Fly   549 LLMDDISWIMKIYLAAIVLCVFCFLLEIGVDKWK 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:304360 16/87 (18%)
TM_PBP1_branched-chain-AA_like 315..>411 CDD:294309 24/105 (23%)
Lig_chan 319..587 CDD:278489 57/309 (18%)
Ir52bNP_725469.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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