DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir10a and glr-8

DIOPT Version :10

Sequence 1:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_001368711.1 Gene:glr-8 / 180924 WormBaseID:WBGene00001619 Length:547 Species:Caenorhabditis elegans


Alignment Length:428 Identity:99/428 - (23%)
Similarity:183/428 - (42%) Gaps:82/428 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 LVAQMLRE---RLNFTMLLQQPEKKYFGERSANGSYNGAIGSIIKDGLDICLTGFFVKDYLVQQY 284
            :|.::|:|   |||.|..:.......:|| ..|||:.||.|.:::..:|: |.|..:.:|.....
 Worm    95 VVMEILKEIGKRLNLTYEILPALGSTWGE-YLNGSWTGAFGQLVRGEVDL-LAGGAIMEYDRSVI 157

  Fly   285 MDFTVAVYDDELCIYVPKASRIPQSILPIFA--VGYDIWLGFVLTAFACALIWLTLRVINLKLRI 347
            .|.|.....:...|.:....:.....|.|..  ..:::|   |:||   |:|.::        .:
 Worm   158 ADLTYPFQFEPTGIMIRSPEKYEDDTLLIVTEPFSWEVW---VITA---AVILIS--------GV 208

  Fly   348 VSLGNQHIVGQALGIMVDT-----WV---VWVRLNLSHLPASYAERMFIGTLCLVSVIFGAIFES 404
            :.|...:|:.:....|..|     ||   ::|:..|...|.|::.|:.:....|.|:...|.|..
 Worm   209 IFLVMTNIIRKVYEEMTVTPFESIWVFFSIFVQQGLPEQPRSWSCRVLVALWWLASITLSATFTG 273

  Fly   405 SLATVYI---HPLYYKDINTMQELDESGLKVVYKYSSMADDLFFSETSPLFASLNKKLSWNRDLR 466
            ||..::.   ..:.:::|:.:..|.:.|     |:..:.|:..|:.|..:..|   ||...|||.
 Worm   274 SLVALFAVDKTNVPFQNIDQLVRLVKQG-----KFEIVMDENSFTRTEMIARS---KLPVYRDLW 330

  Fly   467 AD-VIDEVARFRNKAGVSRYTSLILESSHFTLL-----RKIWVVPEC----------PKYYTISY 515
            .: :::...::.|  |::|..:.:..:..:.||     ...:...:|          |.|.:|..
 Worm   331 HEMIVNHKVKYVN--GIARGVAFVRANPGYALLGPMATLNFYAYSDCKVILFNDGILPVYLSIPL 393

  Fly   516 VMPRDSPWEDAVNALLLRFLNAGLIVKWIQDEKSWVDIKMRSNILEADAESELVRVLTIG----- 575
            |  ::|.:....:..:...:..|...|||.|.:|:|.::   .|.|.::       .|||     
 Worm   394 V--KNSIYSPYFSTKIREMVERGFTQKWIADYRSYVAMQ---KINECNS-------TTIGPKSYL 446

  Fly   576 DL---QLAFYVVIGG---NLLAFLG-FLAEHFRWKLQK 606
            ||   |.||:|.:||   .|..|:| |:.:.||.|:.|
 Worm   447 DLKRAQGAFWVFLGGAGLGLALFVGEFIFKFFREKMTK 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:473866 21/73 (29%)
glr-8NP_001368711.1 PBP2_iGluR_ligand_binding 62..424 CDD:270219 76/356 (21%)

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