DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir10a and gria3a

DIOPT Version :10

Sequence 1:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:600 Species:Drosophila melanogaster
Sequence 2:XP_073805840.1 Gene:gria3a / 170452 ZFINID:ZDB-GENE-020125-5 Length:940 Species:Danio rerio


Alignment Length:672 Identity:130/672 - (19%)
Similarity:218/672 - (32%) Gaps:221/672 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 RAGSDHQDAENPYVQWFL-LRTEIPLSIVTYQ---ENRYWMDDPFGRRNLVLVMSLDQLLTNRGA 102
            |.||......||.|.|.. :..|..|.:|..|   .|..:  |.||||:...|   |......|.
Zfish   326 RRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNIQF--DSFGRRSNYTV---DVYEMKPGG 385

  Fly   103 AAPI---QKASTFFYILADQDKDLSADEQLRLEGSCRQLWTQHKVYNRFFLTRDGVWIYDPFKRR 164
            |..|   .:...|.||:..|..:.|:..:.|.......:...:.:|.|.::..:|         .
Zfish   386 ARKIGYWNEFEKFVYIVEQQVTNESSSVENRTIVVTTIMEAPYVMYKRNYMQLEG---------N 441

  Fly   165 DSAFGRLVRYYGSETLDKLLFRDMAGYPLRIQMFRSVYTRPEFDKETGLLTRVTGVDFLVAQMLR 229
            |...|..|              |:|.               |..|..|:..:::    :||    
Zfish   442 DRYEGYCV--------------DLAS---------------EIAKHVGIKYKLS----IVA---- 469

  Fly   230 ERLNFTMLLQQPEKKYFGERSANGSYNGAIGSIIKDGLDIC---LTGFFVKDYLVQQYMDFTVAV 291
                        :.||........::||.:|.::....||.   ||...|:    ::.:||:...
Zfish   470 ------------DGKYGARDPETKTWNGMVGELVYGRADIAVAPLTITLVR----EEVIDFSKPF 518

  Fly   292 YDDELCIYVPKASRIPQSILP-IFA----VGYDIWLGFVLTAFACALIWLTLRVINLKLRIVSLG 351
            ....:.|.:.|    ||...| :|:    :.|:||:..|   ||    ::.:.|:...:...|..
Zfish   519 MSLGISIMIKK----PQKSKPGVFSFLDPLAYEIWMCIV---FA----YIGVSVVLFLVSRFSPY 572

  Fly   352 NQHIVGQA--------------LGIMVDTWV---VWVRLNLSHLPASYAERMFIGTLCLVSVIFG 399
            ..|:....              .||....|.   .:::......|.|.:.|:..|.....::|..
Zfish   573 EWHLDDNEETKDPQTPPDPPNDFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIII 637

  Fly   400 AIFESSLA---TV--YIHPL-YYKDINTMQE-----LDESGLK--------VVYK----YSSMAD 441
            :.:.::||   ||  .:.|: ..:|:....|     ||....|        .||:    |...|:
Zfish   638 SSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAE 702

  Fly   442 DLFFSETSPLFASLNKKLSWNRDLRADVIDEVARFRNKAGVSRYTSLILESSHFTLLRKIWVVPE 506
            ...|.:|:|                    |.|||.|...|...:   :|||   |:...|.....
Zfish   703 PSVFVKTTP--------------------DGVARVRKSKGKFAF---LLES---TMNEYIEQRKP 741

  Fly   507 C----------PKYYTISYVMPRDSPWEDAVNALLLRFLNAGLIVK------------------- 542
            |          .|.|.::  .|:.|....|||..:|:....||:.|                   
Zfish   742 CDTMKVGGNLDSKGYGVA--TPKGSALRSAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDS 804

  Fly   543 -----------WIQDEKSWVDIKM----RSNILEA----------------DAESELVRVLTIGD 576
                       |:.|.::.|::.:    ...||:.                ....:....|::.:
Zfish   805 KHKARCPTVSLWLTDIRTPVNLAVLKLSEQGILDKLKNKWWYDKGECGTKDSGSKDKTSALSLSN 869

  Fly   577 LQLAFYVVIGGNLLAFLGFLAE 598
            :...||:::||..||....|.|
Zfish   870 VAGVFYILVGGLGLAMTVALVE 891

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:473866 14/76 (18%)
gria3aXP_073805840.1 None

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