DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir10a and Grik5

DIOPT Version :10

Sequence 1:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:600 Species:Drosophila melanogaster
Sequence 2:XP_030098003.1 Gene:Grik5 / 14809 MGIID:95818 Length:1003 Species:Mus musculus


Alignment Length:497 Identity:108/497 - (21%)
Similarity:199/497 - (40%) Gaps:96/497 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 GVWIYDPFKRRDSAFGRLVRYYGSETLDKLLFRDMAGYPLRIQMFRS---VYTRPEFDKETGLLT 215
            |||    :..|..|.       .:.|||..|.:.:|...|.:.....   |..||.|...:| ..
Mouse   412 GVW----YSNRTLAM-------NATTLDINLSQTLANKTLVVTTILENPYVMRRPNFQALSG-NE 464

  Fly   216 RVTG--VDFLVAQMLRERLNFTMLLQQPEKKYFGERSANGSYNGAIGSII-KDGLDICLTGFFV- 276
            |..|  ||.|  :.|.|.|.|...|:..|...:|....|||:.|.:|.:| :...|:.:..|.: 
Mouse   465 RFEGFCVDML--RELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRQKADLAVAAFTIT 527

  Fly   277 --KDYLV---QQYMDFTVAVYDDELCIYVPKASRIPQ--SILPIFAVGYDIWLGFVLTAF---AC 331
              ::.::   :.:|...:::      :|.....|.|.  |.|..|:..  :|| |:|.|:   :|
Mouse   528 AEREKVIDFSKPFMTLGISI------LYRVHMGRKPGYFSFLDPFSPA--VWL-FMLLAYLAVSC 583

  Fly   332 ALIWLTLRVIN---------LKLRIVSLGNQHIVGQALGIMVDTWVVWVRLNLSHLPASYAERMF 387
            .| :|..|:..         |:.|...|.||:.:|.:|...|..   :::.....:|.:.:.|..
Mouse   584 VL-FLAARLSPYEWYNPHPCLRARPHILENQYTLGNSLWFPVGG---FMQQGSEIMPRALSTRCV 644

  Fly   388 IGTLCLVSVIFGAIFESSLATVYIHPLYYKDINTMQEL-DESGLK--VVYKYSSMADDLFFSETS 449
            .|.....::|..:.:.::||...........:.:..:| |::.::  .::..|:|.   ||..:.
Mouse   645 SGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMT---FFQNSR 706

  Fly   450 PLFASLNKKLSWNRDLRADVI-----DEVARFRNKAGVSRYTSLILESSHFTLLRKIWVVPEC-- 507
              :.:..:..::.:..:..|.     :.:||..|    ||| :.:|||:.....|::    .|  
Mouse   707 --YQTYQRMWNYMQSKQPSVFVKSTEEGIARVLN----SRY-AFLLESTMNEYHRRL----NCNL 760

  Fly   508 --------PKYYTISYVMPRDSPWEDAVNALLLRFLNAGLIVKWIQDEKSWVDIKMRSNILEADA 564
                    .|.|.|.  ||..||:.|.:...:|:......:.  |...|.|...:...   |.|.
Mouse   761 TQIGGLLDTKGYGIG--MPLGSPFRDEITLAILQLQENNRLE--ILKRKWWEGGRCPK---EEDH 818

  Fly   565 ESELVRVLTIGDLQLAFYVVIGGNLLAFLGFLAEHFRWKLQK 606
            .::.:.:..||.:   |.|:|.|.::|....:.| |.|..::
Mouse   819 RAKGLGMENIGGI---FVVLICGLIIAVFVAVME-FIWSTRR 856

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:473866 19/80 (24%)
Grik5XP_030098003.1 PBP1_iGluR_Kainate_KA1_2 23..424 CDD:380616 5/22 (23%)
Periplasmic_Binding_Protein_Type_2 437..808 CDD:473866 85/404 (21%)

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