DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir10a and grin2ba

DIOPT Version :10

Sequence 1:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_001429729.1 Gene:grin2ba / 110438919 ZFINID:ZDB-GENE-090821-2 Length:1606 Species:Danio rerio


Alignment Length:431 Identity:77/431 - (17%)
Similarity:168/431 - (38%) Gaps:90/431 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 VDFLVAQMLRERLNFTMLLQQPEKKYFGERSANGSYNGAIGSIIKDGLDICLTGFFVKDYLVQQY 284
            :|.|  :.:.:.:.||..|........|:: .||::||.:|.::.....:.:....:.:.. .:.
Zfish   515 IDIL--KKIAKNVKFTYDLYLVTNGKHGKK-INGTWNGMVGEVVLKNAHMAVGSLTINEER-SEV 575

  Fly   285 MDFTVAVYDDELCIYVPKASRI--PQSILPIFAVGYDIWLGFVLTAFACALIWLTLRVINLKL-- 345
            :||:|...:..:.:.|.:::..  |.:.|..|:.  |:|    :..|...|:...:.|...:.  
Zfish   576 IDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSA--DVW----IMMFVMLLLVSAIAVFIFEYFS 634

  Fly   346 -----RIVSLGNQ-----HIVGQALGIMVDTWVVW-VRLNLS---HLPASYAERMFIGTLCLVSV 396
                 |.::.|.:     ..:|:|:      |::| :..|.|   ..|.....::.:......:|
Zfish   635 PVGYNRCLADGREAGGPSFTIGKAI------WLLWGLVFNNSVPVQNPRGTTSKIMVSVWAFFAV 693

  Fly   397 IFGAIFESSLATVYIHPLYYKDINTMQELDESGLKVVYKYSSMADDLFF--SETSPLF------- 452
            ||.|.:.::||...|...|                 |.:.|.::|..|.  ::.||.|       
Zfish   694 IFLASYTANLAAFMIQEEY-----------------VDQVSGLSDKKFQNPNDFSPPFRFGTVPN 741

  Fly   453 ASLNKKLSWN-RDLRADVIDEVARFRNKAGVSRYTSL--------ILESSHFTLLR------KIW 502
            .|..:.:..| ||:.:.::    :|..:..|....||        |.:::....:.      |:.
Zfish   742 GSTERNIRNNYRDMHSYMV----KFHQRNVVEALESLKTGKLDAFIYDAAVLNYMAGRDEGCKLV 802

  Fly   503 VVPECPKYYTISY--VMPRDSPWEDAVNALLLRFLNAGLIVKWIQDEKSWVDIKMRSNILEADAE 565
            .:.....:.:..|  .:.:||.|:..|:..:|:....|   :..:.|..|:     :.|...:..
Zfish   803 TIGSGKVFASTGYGIAIQKDSGWKRQVDLAILQLFGDG---EMEELEALWL-----TGICHHEKN 859

  Fly   566 SELVRVLTIGDLQLAFYVVIGGNLLAFLGFLAEH-FRWKLQ 605
            ..:...|.:.::...||::.....|:.:.|:||| |.|.::
Zfish   860 EVMSSQLDVDNMAGVFYMLGAAMALSLITFIAEHVFYWHMR 900

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:473866 14/73 (19%)
grin2baNP_001429729.1 None

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