DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG44422 and Vsnl1

DIOPT Version :10

Sequence 1:NP_572699.2 Gene:CG44422 / 32063 FlyBaseID:FBgn0265595 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_036818.2 Gene:Vsnl1 / 24877 RGDID:3966 Length:191 Species:Rattus norvegicus


Alignment Length:182 Identity:71/182 - (39%)
Similarity:120/182 - (65%) Gaps:13/182 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 ARYRPDSLSALSRATRFTEDEIKRIYRGFKAECPTGVVKEDTFKVIYSQFFPQGANPTLYAHYVF 315
            ::..|:.:..|.::|.|.|.|:|:.|:||..:||:|.:..:.|:.:|.:|||.| :.:.:|.:.|
  Rat     6 SKLAPEVMEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLEEFQQLYVKFFPYG-DASKFAQHAF 69

  Fly   316 NTLDQDHSGIVSFEDFVQGLSILSRGSVEEKLRWTFSLYDINGDGFITREEMTDIVTAIYELMG- 379
            .|.|::..|.:.|.:|:..|||.||||.|:||.|.|::||::|||.|||.||.:|:.|||:::| 
  Rat    70 RTFDKNGDGTIDFREFICALSITSRGSFEQKLNWVFNMYDLDGDGKITRVEMLEIIEAIYKMVGT 134

  Fly   380 ----RLPDE--CPEEEKIKGKVEQIFQKMDTNRDGVVTLEEFLEACRNDDAI 425
                ::.::  .||:     :|::||.|||.|:|..:||:||.||.::|.:|
  Rat   135 VIMMKMNEDGLTPEQ-----RVDKIFSKMDKNKDDQITLDEFKEAAKSDPSI 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG44422NP_572699.2 FRQ1 <310..420 CDD:444056 50/116 (43%)
Vsnl1NP_036818.2 FRQ1 21..177 CDD:444056 66/161 (41%)

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