DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG44422 and ncs-4

DIOPT Version :10

Sequence 1:NP_572699.2 Gene:CG44422 / 32063 FlyBaseID:FBgn0265595 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_509708.2 Gene:ncs-4 / 184757 WormBaseID:WBGene00008998 Length:224 Species:Caenorhabditis elegans


Alignment Length:188 Identity:64/188 - (34%)
Similarity:109/188 - (57%) Gaps:13/188 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 YRPDSLSALSRATRFTEDEIKRIYRGFKAECPTGVVKEDTFKVIYSQFFPQGANPTLYAHYVFNT 317
            :||.||..:...|.|:::|::.|||.||...|..|:.::..:..:::.||.| :...|:..:|.|
 Worm    40 FRPSSLQQVVDETHFSKNEVRAIYRAFKETSPNAVINKNIMREKFAELFPHG-DIEHYSDLLFET 103

  Fly   318 LDQDHSGIVSFEDFVQGLSILSRGSVEEKLRWTFSLYDINGDGFITREEMTDIVTAIYELMGR-- 380
            .|.|.:|.::|::||:.||||.||:::|||.|.:.|||....|.:|.:.:..::|::.:|||:  
 Worm   104 FDNDGNGTINFQEFVKALSILCRGTLDEKLDWLYKLYDPKEKGEVTWDRLFYVITSMDDLMGKHA 168

  Fly   381 LPDECPEEEKIKGKVE---QIFQKMDTNRDGVVTLEEFLEACRNDDAISRSMS--YTV 433
            .|....|:     |.|   |:|.|.|..:.|.:|.::||..|:.|..|..|:|  ||:
 Worm   169 RPHHTREQ-----KCELTNQVFAKFDVGKKGRITKKDFLHICKTDRTILNSISALYTL 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG44422NP_572699.2 FRQ1 <310..420 CDD:444056 40/114 (35%)
ncs-4NP_509708.2 FRQ1 79..206 CDD:444056 43/132 (33%)
EFh 101..149 CDD:238008 22/47 (47%)

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