DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXA10 and HGTX

DIOPT Version :9

Sequence 1:NP_061824.3 Gene:HOXA10 / 3206 HGNCID:5100 Length:410 Species:Homo sapiens
Sequence 2:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster


Alignment Length:450 Identity:92/450 - (20%)
Similarity:139/450 - (30%) Gaps:138/450 - (30%)


- Green bases have known domain annotations that are detailed below.


Human    49 AGGGGGGGYYAH---GGVYLPPAADLPYGLQSCGLFPTLGGKRNEAASPGSGGGGGGLGPGAHGY 110
            |...|....:||   ...|....||......:..::.......|..:|..:......|...|||.
  Fly   107 AMSNGFADVHAHAMAAADYQQQLADYHSAAAAAAVYANNNNNNNNNSSNNNNSSPLMLLKAAHGG 171

Human   111 GPSPIDLWLDAPRSCRMEPPDGP--PPPPQQQPPPPPQPPQPAPQATSCSFAQNIKEESSYCLYD 173
            |               ::..|.|  .|||..........|.|..:..|   :..:....||.|..
  Fly   172 G---------------LKDSDSPSTTPPPASSRLHSDSSPSPRYEHNS---SPGVDSAKSYALSQ 218

Human   174 ----SADKCPKVSATAAELAPFPRGPPPDG------------------------CALGTSSGVPV 210
                :.|.| :.|.:|:        |||.|                        .||..::....
  Fly   219 RSSGAEDPC-QTSESAS--------PPPQGQNDYSPENLSSQRAKFQHHHGVNPLALHNANHAGN 274

Human   211 PGYFR--------------------LSQAYGTAKGYGSGGGGAQQLGAGPFPAQP---------- 245
            ||...                    |.......||.|.||..|...|.. :...|          
  Fly   275 PGCHNNNNHMDHKLPLSFLGPPLAALHSMTTEMKGQGVGGSSASANGLS-YSHSPNSHLISDRGS 338

Human   246 PGRGFDLPPALASGSADAARKERALD---SPPPPTLACG----SGGGSQGDEEAHASSSAAEELS 303
            .|..........:.::..|.....:|   |.|||..:.|    :|.|......|.|::..|:.||
  Fly   339 GGSSSSSSTTTTNTNSQGAPNPHGIDTILSKPPPVTSAGLSALTGAGIPRFSIAAAAAGMAQYLS 403

Human   304 PAPSESSKASPEKDSLGN--------------------SKGENAANWLTA-------------KS 335
                 .|:.:|.|...|:                    :..|..:|.::|             |.
  Fly   404 -----QSQGAPLKTHAGHIVDRTHLYWPGLQGLVANPIAWRERLSNTMSANLSQSHQHHPSNDKD 463

Human   336 GRKK--RCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKK 393
            |:||  |..::..|...|||.|....||....|.:::.::.:::.|||:||||||.|.:|
  Fly   464 GKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRK 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXA10NP_061824.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..158 15/70 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 221..339 32/167 (19%)
Homeobox 339..392 CDD:278475 20/54 (37%)
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 41/221 (19%)
Homeobox 469..523 CDD:395001 19/53 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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