DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXA10 and Dbx

DIOPT Version :9

Sequence 1:NP_061824.3 Gene:HOXA10 / 3206 HGNCID:5100 Length:410 Species:Homo sapiens
Sequence 2:NP_647677.2 Gene:Dbx / 38254 FlyBaseID:FBgn0261723 Length:741 Species:Drosophila melanogaster


Alignment Length:393 Identity:91/393 - (23%)
Similarity:122/393 - (31%) Gaps:167/393 - (42%)


- Green bases have known domain annotations that are detailed below.


Human    15 PTTMSCSESPAANSFLVDSLISSGRGEAGGGGGGAGGGGGGGYYAHGGVYLPPAADLPYGLQSCG 79
            |.|.|.|.||  .|.:.||..:.|...|.|.|.|.|..|... ..|......|..|      |..
  Fly   274 PQTASSSSSP--GSTISDSDNNHGASTANGNGSGTGNSGQDA-RPHELANSNPDED------SSA 329

Human    80 LFPTLGGKRNEAASPGSGGGGGGLGPGAHGYG-PSPIDLWLDAPRSCRMEPPDGPPPPPQQQPPP 143
            .......|:.:....|:||.||| |.|.||:| |:|              ||  |||||....|.
  Fly   330 SRRLTQDKQQQQQLLGAGGTGGG-GGGGHGHGHPTP--------------PP--PPPPPVIAKPM 377

Human   144 PPQPPQPAPQATSCSFAQNIKEESSYCLYDSADKCPKVSATAAELAPFPRGPPPDGCALGTSSGV 208
            |.:|....|...:.....::   .::|                      |.|             
  Fly   378 PSRPTPFLPHTLNHPHLHSL---LAHC----------------------RNP------------- 404

Human   209 PVPGYFRLSQAYGTAKGYGSGGGGAQQLGAGPFPAQPPGRGFDLPPALASGSADAARKERALDSP 273
                             |.|       :||..||. |||:||..                     
  Fly   405 -----------------YMS-------VGAQVFPL-PPGQGFPW--------------------- 423

Human   274 PPPTLACGSGGGSQGDEEAHASSSAAEELSPAPSESSKASPEKDSLGNSKGENAANWLTAKSGRK 338
                              ||               |::..|.:                   |..
  Fly   424 ------------------AH---------------STRGKPRR-------------------GMM 436

Human   339 KRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMNRENRIREL 403
            :|..::..|...|||.|....|:::..|.:::..:.|.|.||||||||||||.    |.::.|||
  Fly   437 RRAVFSDSQRKGLEKRFQQQKYISKPDRKKLAERLGLKDSQVKIWFQNRRMKW----RNSKEREL 497

Human   404 TAN 406
            .|:
  Fly   498 LAS 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXA10NP_061824.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..158 24/69 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 221..339 16/117 (14%)
Homeobox 339..392 CDD:278475 22/52 (42%)
DbxNP_647677.2 Homeobox 437..490 CDD:278475 22/56 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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