DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXA10 and PHDP

DIOPT Version :9

Sequence 1:NP_061824.3 Gene:HOXA10 / 3206 HGNCID:5100 Length:410 Species:Homo sapiens
Sequence 2:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster


Alignment Length:96 Identity:35/96 - (36%)
Similarity:54/96 - (56%) Gaps:10/96 - (10%)


- Green bases have known domain annotations that are detailed below.


Human   310 SKASPEKDSLGN--------SKGENAANWLTAKSGRKK-RCPYTKHQTLELEKEFLFNMYLTRER 365
            |:..|...::|:        |.|::..: ||.||.::: |..:|.:|..||||.||...|.....
  Fly    78 SEFYPATHNIGSYNTDFHLKSYGDDGLS-LTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYT 141

Human   366 RLEISRSVHLTDRQVKIWFQNRRMKLKKMNR 396
            |.||:..:|||:.:|::||||||.|.:|..|
  Fly   142 REEIASKLHLTEARVQVWFQNRRAKFRKQER 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXA10NP_061824.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..158
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 221..339 9/36 (25%)
Homeobox 339..392 CDD:278475 24/53 (45%)
PHDPNP_523834.1 Homeobox 116..168 CDD:278475 24/51 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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