DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HOXA10 and Rx

DIOPT Version :9

Sequence 1:NP_061824.3 Gene:HOXA10 / 3206 HGNCID:5100 Length:410 Species:Homo sapiens
Sequence 2:NP_726006.3 Gene:Rx / 37367 FlyBaseID:FBgn0020617 Length:904 Species:Drosophila melanogaster


Alignment Length:501 Identity:105/501 - (20%)
Similarity:157/501 - (31%) Gaps:191/501 - (38%)


- Green bases have known domain annotations that are detailed below.


Human     3 ARKGYLLP-SPNYPTTMSCSESPAANSFLVDSLISSGRGEAGGGGGGAGGGGGGGYYAHGGVYLP 66
            |:.|..|| .|..|        |......|.:......|:..||..|.....|.|:..|.|    
  Fly   213 AKNGGALPYGPPTP--------PGGQQPQVPNATPLHHGQQMGGQAGHATHAGHGHPTHHG---- 265

Human    67 PAADLPYGLQSCGLFPTLGGKRNEAASPGSGGGGGGLGPGAHGYGPSPIDL---WLDAPRSCRME 128
               ..|:|..:                      ..|.|.|.|||| .|.:.   :|::... .:|
  Fly   266 ---HAPFGYHN----------------------AFGFGQGGHGYG-HPEEAAGNYLNSMHQ-MVE 303

Human   129 PPDGPPPPPQQQPPPPPQPPQ---PAPQATSCSFAQNIKEESSYCLYDSADKCPKVSATAAELAP 190
            ............|||.|.||.   ...|..:...||..::::.:..|             |:.:|
  Fly   304 ANQLQTGANGANPPPAPLPPSSFGSHQQHLAALAAQAQEQQNQHSKY-------------AKSSP 355

Human   191 FPRGPPPDGCALGTSSGVPVPGYFRLSQAYGTAKGYGSGGGGAQQLGAGPFPAQPPGRGFDLPPA 255
            ...||||           |...||..||   ||                  |..|....:| ..:
  Fly   356 TGAGPPP-----------PPGAYFMESQ---TA------------------PVAPSQINYD-ERS 387

Human   256 LASGS------ADAARKERALDSPPPPT----------------------LACG----------- 281
            ::|.|      .|||:.:..:.|||.|:                      ||.|           
  Fly   388 MSSASDLEEDDDDAAKLQLDVTSPPTPSPRGQLAAKRKSAGVFCDDNEPKLANGQLPGGNYGIRP 452

Human   282 ----------------------------------------------SGGGSQGD--EEAHASSSA 298
                                                          :|..:.||  |..:|.|.:
  Fly   453 RSMEEVHHQQQSHHHQQQQQQQQQQQQLQQQQGFQHDFRNSGNGNPNGNSNSGDHGERLNADSDS 517

Human   299 AEELSPAPSE-----SSKASPEKDSLGN---SKGENAANWLTAKSGRKKRCPYTKHQTLELEKEF 355
            ....|.|.||     :|....||.:.|:   .:.:|.|.    |..|:.|..:|.:|..|||:.|
  Fly   518 LVNGSCASSEDLNQTNSSEQGEKITSGSDDEGQDDNCAK----KKHRRNRTTFTTYQLHELERAF 578

Human   356 LFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMNRENRIR 401
            ..:.|.....|.|::..|:|.:.:|::||||||.|.::..:...:|
  Fly   579 EKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKSESLR 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXA10NP_061824.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..158 17/74 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 221..339 35/212 (17%)
Homeobox 339..392 CDD:278475 20/52 (38%)
RxNP_726006.3 Homeobox 563..615 CDD:278475 20/51 (39%)
OAR 876..892 CDD:281777
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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