DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXA10 and al

DIOPT Version :9

Sequence 1:NP_061824.3 Gene:HOXA10 / 3206 HGNCID:5100 Length:410 Species:Homo sapiens
Sequence 2:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster


Alignment Length:149 Identity:44/149 - (29%)
Similarity:63/149 - (42%) Gaps:34/149 - (22%)


- Green bases have known domain annotations that are detailed below.


Human   251 DLPPALASGSADAARKERALDSPPPPTLACGSGGGSQGDEEAHASSSAAEELSPAPSESSKASPE 315
            |..|..::.||.||.......|...|:.|.|:.||:.                         ||.
  Fly    28 DRAPGSSAASAGAALTVSMSVSGGAPSGASGASGGTN-------------------------SPV 67

Human   316 KDSLGNSKGENAANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMY---LTRERRLEISRSVHLTD 377
            .|  |||..| |..:...:..|:.|..:|..|..||||.|....|   .|||   |::..:.||:
  Fly    68 SD--GNSDCE-ADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE---ELAMKIGLTE 126

Human   378 RQVKIWFQNRRMKLKKMNR 396
            .::::||||||.|.:|..:
  Fly   127 ARIQVWFQNRRAKWRKQEK 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXA10NP_061824.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..158
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 221..339 21/87 (24%)
Homeobox 339..392 CDD:278475 22/55 (40%)
alNP_722629.1 Homeobox 89..141 CDD:278475 22/54 (41%)
OAR 374..391 CDD:281777
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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