DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment antdh and NRE1

DIOPT Version :9

Sequence 1:NP_572695.2 Gene:antdh / 32058 FlyBaseID:FBgn0026268 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_012301.3 Gene:NRE1 / 854853 SGDID:S000001474 Length:254 Species:Saccharomyces cerevisiae


Alignment Length:231 Identity:66/231 - (28%)
Similarity:105/231 - (45%) Gaps:45/231 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RVAVVTGASSGIGSAIA-------KDLVLAGMTVVGLARRVDRVKELQRELPAEKRG-KLFALYC 63
            :|.:|||.|.|||.:|.       ||.|     |.|:||....:|:|:     ||.| :.|.:..
Yeast     3 KVILVTGVSRGIGKSIVDVLFSLDKDTV-----VYGVARSEAPLKKLK-----EKYGDRFFYVVG 57

  Fly    64 DVGNESSVNEAFDWIIQKLGAIDVLVNNAGTLQPGYLV---DMNPAVMQQVLQTNIMGIVLCTQR 125
            |:..:|.:.:..:..::..|.||.||.|||.|:|...|   |:|  ..:::...|...||.....
Yeast    58 DITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVN--AWKKLYDINFFSIVSLVGI 120

  Fly   126 AVRSMRERKFDGHVVLINSILGHKTMTATEGVAPDVNVYPPSK----HAVTALAEGYRQEFFGLG 186
            |:..:  :|.:|:||.::|       .|..........|..||    |....||...||      
Yeast   121 ALPEL--KKTNGNVVFVSS-------DACNMYFSSWGAYGSSKAALNHFAMTLANEERQ------ 170

  Fly   187 TRIKITSVSPGVVDTEIVPDSIREAIKDRMLHSEDI 222
              :|..:|:||:|||: :..:|||.:....:.:|.:
Yeast   171 --VKAIAVAPGIVDTD-MQVNIRENVGPSSMSAEQL 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
antdhNP_572695.2 YdfG 1..250 CDD:226674 66/231 (29%)
NADB_Rossmann 1..245 CDD:304358 66/231 (29%)
NRE1NP_012301.3 SPR-like_SDR_c 4..246 CDD:187625 66/230 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341288
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.