DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dlic and xbx-1

DIOPT Version :9

Sequence 1:NP_572694.1 Gene:Dlic / 32057 FlyBaseID:FBgn0030276 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_506683.2 Gene:xbx-1 / 184080 WormBaseID:WBGene00006960 Length:370 Species:Caenorhabditis elegans


Alignment Length:394 Identity:76/394 - (19%)
Similarity:139/394 - (35%) Gaps:95/394 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 MKKKDAAAEKENLWSAILNEVQTQGSTKLPS-----NKSVLVLGDNATGKTTLIAK-LQGVEDPK 76
            ::.|..|||   |...:.:|..||....|..     ...::..|:..:||::.:.. |:..||.|
 Worm    12 VENKQRAAE---LKQKLDDENGTQSDNYLSEVRRRHESHIIFAGNRKSGKSSFMLNFLERKEDLK 73

  Fly    77 KGSGLEYAYI-----DVKDEYRDDMTRLGVWVLDGDPGHTNLLHYALNETNYAHTLVILTVSMT- 135
            ...||||.|.     :|||       ...:|.|.|....|.||...:...|.....:||.:.|| 
 Worm    74 DSVGLEYTYARRTRGNVKD-------IANLWELGGGATVTELLSVPITMKNVEICSLILLLDMTN 131

  Fly   136 --QPWGWLEQLNHWIKVLGQHIDSLQLDAKEKEAARQRLTTTWQSYCEVGDDLDPGSPVKRTMRN 198
              :.|..:|:....::.|.::::...::.:.:.|.:.||                        |.
 Worm   132 LDEMWITIEKTVDSVRRLVENLERQDINLQTRLAEKMRL------------------------RL 172

  Fly   199 NSIDEDDLLPLTEDALITNLGLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWIRNFCLRHGTS 263
            ...|:..|      .:.....:.:.:|.:|.|.....|.|   :..|   :.|::|.....:|.:
 Worm   173 EKYDDGSL------KMCNPCPIPVTIVASKYDEFQNFESE---KRRH---LCQFLRFLAYSYGAN 225

  Fly   264 LFYTSVKEDKNCDVLYKYLTHRIYGLPFRTPALVVEKDAVLIPAGWDSLKKISI--LYENMHG-- 324
            |...|.:.::...::....:|..:|.......:......:.:..|:|||:.|.|  ..:|..|  
 Worm   226 LMMFSSRMEQFPKLVKNMTSHFAFGTVCPQGYMTDHNKPMFVKCGFDSLESIGIPPASDNFMGAS 290

  Fly   325 -------------------------VKAENPYTD-IIKSPPTRKAVSNREAEVQT-----EDEQA 358
                                     .|.::|..| :.|.|.....|..:..|::.     .|.:|
 Worm   291 SPFNLWRESFISLWPQKTGTIDIEDTKKQDPMIDPVFKEPNIDNLVEIKRKELKNHIRSKRDREA 355

  Fly   359 FLAR 362
            ..||
 Worm   356 AEAR 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DlicNP_572694.1 DLIC 25..493 CDD:283447 74/387 (19%)
ABC_ATPase 43..>79 CDD:213179 8/41 (20%)
xbx-1NP_506683.2 DLIC 37..>294 CDD:283447 57/299 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.870

Return to query results.
Submit another query.