Protein Alignment Lint-1 and Chd5

DIOPT Version :9

• Sequence 1: NP_001285113.1
• Gene: Lint-1 / 32055
• FlyBaseID: FBgn0030274
• Length: 602
• Species: Drosophila melanogaster
• Sequence 2: XP_017449128.1
• Gene: Chd5 / 691589
• RGDID: 1582725
• Length: 2000
• Species: Rattus norvegicus
• Alignment Length: 526
• Identity: 95/526 - (18%)
• Similarity: 175/526 - (33%)
• Gaps: 175/526 - (33%)

  Fly   151 LSQDDDSGMPPLKLSELDENIPLMLAPPVRGLGQQIAAVKPEPEWLQGDEATVSVPPPPPQSKSK 215
            :|:::|.|     |...::..|   |.||       :..|.:|:.|:..::         :.|.|
  Rat    25 MSEEEDGG-----LEGFEDFFP---AEPV-------SLPKKKPKKLKESKS---------KGKRK 65

  Fly   216 LMKGSLDSTPAKRENISRSSPPPLAPITQTVVAELSQVPPSPQAESPPVNFHVVAQSRKNLQQAL 280
            ..:||.|......|::...|                        ||...::....:.:|.|::
  Rat    66 KKEGSNDELSENEEDLEEKS------------------------ESEGSDYSPTKKKKKKLKE-- 104

  Fly   281 RRARKTKQQPRLFDDEEDLEITSLQNDRNKNR---------------------TSDGKGTPPSLE 324
            ::.:|.|::.| .:||||.|...|:..::..:                     .::.|.....|.
  Rat   105 KKEKKAKRKKR-DEDEEDNEDGGLKEPKSSGQLMAEWGLDDVDYLFSEDDYHTLTNYKAFSQFLR 168

  Fly   325 PTNAAAN----QAAKKTIPQMSSQGMAKNNTAKSKNTCRKSS----------------------- 362
            |..|..|    .:...|:.....:..:.||..|..:....::
  Rat   169 PLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLAISPQQVP 233

  Fly   363 -PTPTSSGQSQ----PAV--SSSGSSDDSSAELQQEQQRRVASAAQWR----DEPRESRTQPEEY 416
             |.|....:::    |.|  .:.|:.|..    ::.:.:||| ..::|    .:.::..:..|:.
  Rat   234 QPLPVRKAKTKEGKGPGVRKKNKGAKDSK----KKGRGKRVA-GLKFRFGGISKRKKGSSSEEDE 293

  Fly   417 GQETFLGLFELYSPEV-------LKKLSQRHSKRKRRTVQNASGVDFHYGQQLNAVDALVMGVRG 474
            .:::.|....::|..|       |.|.::|..|:||        :|...|.:.:..|...:..:|
  Rat   294 PEDSDLDNASIHSSSVRSECSAALGKKNKRRRKKKR--------IDDGDGYETDHQDYCEVCQQG 350

  Fly   475 QKKTKEKSEFLLSPTEKRLQANSKRTYTRKSKSPDEISEKSSAGGGS-------GASGTASSSAC 532
                   .|.:|..|       ..|.|......|:  .||:..|..|       |..........
  Rat   351 -------GEIILCDT-------CPRAYHLVCLDPE--LEKAPEGKWSCPHCEKEGIQWEPKDDDE 399

  Fly   533 QHKDGGASKCRKCRE--------CRECKRRVETEAMYCHLCSGLYHMDCHEFTKNRQLMQLQNSR 589
            :.::||      |.|        ||.||.  ..|.:.|..|...||:.|    .|..|.::.|..
  Rat   400 EEEEGG------CEEEEDDHMEFCRVCKD--GGELLCCDACPSSYHLHC----LNPPLPEIPNGE 452

  Fly   590 --CPPC 593
              ||.|
  Rat   453 WLCPRC 458

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lint-1	NP_001285113.1	PHD	548..593	CDD:214584	15/46 (33%)
Chd5	XP_017449128.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0383
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900