Protein Alignment Lint-1 and Chd5

DIOPT Version :10

• Sequence 1: NP_572692.1
• Gene: Lint-1 / 32055
• FlyBaseID: FBgn0030274
• Length: 602
• Species: Drosophila melanogaster
• Sequence 2: XP_017449128.1
• Gene: Chd5 / 691589
• RGDID: 1582725
• Length: 2000
• Species: Rattus norvegicus
• Alignment Length: 526
• Identity: 95/526 - (18%)
• Similarity: 175/526 - (33%)
• Gaps: 175/526 - (33%)

  Fly   151 LSQDDDSGMPPLKLSELDENIPLMLAPPVRGLGQQIAAVKPEPEWLQGDEATVSVPPPPPQSKSK 215
            :|:::|.|     |...::..|   |.||       :..|.:|:.|:..::         :.|.|
  Rat    25 MSEEEDGG-----LEGFEDFFP---AEPV-------SLPKKKPKKLKESKS---------KGKRK 65

  Fly   216 LMKGSLDSTPAKRENISRSSPPPLAPITQTVVAELSQVPPSPQAESPPVNFHVVAQSRKNLQQAL 280
            ..:||.|......|::...|                        ||...::....:.:|.|::
  Rat    66 KKEGSNDELSENEEDLEEKS------------------------ESEGSDYSPTKKKKKKLKE-- 104

  Fly   281 RRARKTKQQPRLFDDEEDLEITSLQNDRNKNR---------------------TSDGKGTPPSLE 324
            ::.:|.|::.| .:||||.|...|:..::..:                     .::.|.....|.
  Rat   105 KKEKKAKRKKR-DEDEEDNEDGGLKEPKSSGQLMAEWGLDDVDYLFSEDDYHTLTNYKAFSQFLR 168

  Fly   325 PTNAAAN----QAAKKTIPQMSSQGMAKNNTAKSKNTCRKSS----------------------- 362
            |..|..|    .:...|:.....:..:.||..|..:....::
  Rat   169 PLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLAISPQQVP 233

  Fly   363 -PTPTSSGQSQ----PAV--SSSGSSDDSSAELQQEQQRRVASAAQWR----DEPRESRTQPEEY 416
             |.|....:::    |.|  .:.|:.|..    ::.:.:||| ..::|    .:.::..:..|:.
  Rat   234 QPLPVRKAKTKEGKGPGVRKKNKGAKDSK----KKGRGKRVA-GLKFRFGGISKRKKGSSSEEDE 293

  Fly   417 GQETFLGLFELYSPEV-------LKKLSQRHSKRKRRTVQNASGVDFHYGQQLNAVDALVMGVRG 474
            .:::.|....::|..|       |.|.::|..|:||        :|...|.:.:..|...:..:|
  Rat   294 PEDSDLDNASIHSSSVRSECSAALGKKNKRRRKKKR--------IDDGDGYETDHQDYCEVCQQG 350

  Fly   475 QKKTKEKSEFLLSPTEKRLQANSKRTYTRKSKSPDEISEKSSAGGGS-------GASGTASSSAC 532
                   .|.:|..|       ..|.|......|:  .||:..|..|       |..........
  Rat   351 -------GEIILCDT-------CPRAYHLVCLDPE--LEKAPEGKWSCPHCEKEGIQWEPKDDDE 399

  Fly   533 QHKDGGASKCRKCRE--------CRECKRRVETEAMYCHLCSGLYHMDCHEFTKNRQLMQLQNSR 589
            :.::||      |.|        ||.||.  ..|.:.|..|...||:.|    .|..|.::.|..
  Rat   400 EEEEGG------CEEEEDDHMEFCRVCKD--GGELLCCDACPSSYHLHC----LNPPLPEIPNGE 452

  Fly   590 --CPPC 593
              ||.|
  Rat   453 WLCPRC 458

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lint-1	NP_572692.1	PHD	548..593	CDD:214584	15/46 (33%)
Chd5	XP_017449128.1	CHDNT	144..199	CDD:462357	7/54 (13%)
		PHD1_CHD_II	343..385	CDD:277006	11/57 (19%)
		PHD2_CHD_II	416..458	CDD:277007	15/47 (32%)
		CD1_tandem_CHD3-4_like	463..542	CDD:349314
		CD2_tandem_CHD3-4_like	587..640	CDD:349309
		PLN03142	696..>1214	CDD:215601
		DUF1087	1296..1349	CDD:461922
		CHDII_SANT-like	1390..1530	CDD:461920
		LGT	<1533..1684	CDD:469786
		CHDCT2	1731..1876	CDD:462358