DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lint-1 and Phf21b

DIOPT Version :10

Sequence 1:NP_572692.1 Gene:Lint-1 / 32055 FlyBaseID:FBgn0030274 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_001074635.2 Gene:Phf21b / 271305 MGIID:2443812 Length:487 Species:Mus musculus


Alignment Length:476 Identity:108/476 - (22%)
Similarity:161/476 - (33%) Gaps:154/476 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 LKLSELDENIPLMLAPPVRG-LGQQIAAVKPEPEWLQGDEA---TVSVPPPPPQSKS-------- 214
            ::|....|.:.:.||....| |.:|:...:|....|...:|   |.:||...||..|        
Mouse     1 MELQSRSEALAVELARHQNGDLKKQLHERQPRIAALSDKQALGSTTAVPVTGPQVSSLQRLAGQG 65

  Fly   215 ----------KLMKGSLDSTPAKRENISRSSPPPLAPITQ--TVVAELSQVPPSPQAESPPVNFH 267
                      .|:..||..||      .|..||...|..|  |||:..:..|..|.|.: .|| |
Mouse    66 AAVLPQVRPKTLIPDSLPVTP------GRDRPPKQPPTFQKATVVSIKNPSPALPTANN-TVN-H 122

  Fly   268 VVAQSRKNLQQALRRARKTKQQPRLFDDEEDLEITSLQNDRNKNRTSDGKG-TPPSLEPTNAAAN 331
            |...|.:.  |||               .|...|||       ..:|.|.. ...|..|:| ||.
Mouse   123 VPTPSSQT--QAL---------------TEPTAITS-------PLSSAGVAYAIISTSPSN-AAT 162

  Fly   332 QAAKKTIPQMSSQGMAKNNTAKSKNTCRKSSPTPTSSGQS----QPAVSSSGSSDDSSAELQQEQ 392
            .....|:| ::|.|:             |..|...|:.:.    ||.|.   :..:||||.:...
Mouse   163 ITPSTTVP-VASDGI-------------KVQPLLISADKKVIIIQPQVK---TQPESSAEPEPPT 210

  Fly   393 QRRVASAAQWRDEPRESRTQPEEYGQETFLGLFELYSPEVLKKLSQRHSKRKRRTVQNASGVDFH 457
            :.....|...:::...|:..||:......||   |.:.|.|:::..:..:||||:..|.:     
Mouse   211 EEPSQGAQATKEDQPPSKENPEKIAFMVALG---LVTTEHLEEIQSKRQERKRRSTANPA----- 267

  Fly   458 YGQQLNAVDALVMGVRGQKKTKEK---SEFLLSPTEKRLQANSKRTYTRKSKSPDEISEKSSAGG 519
                          ..|..:|:.|   |.:|.:|.....:||....: :...:.||.        
Mouse   268 --------------YSGFLETERKRLASSYLHNPLFLTARANEDPCW-KGEITHDEF-------- 309

  Fly   520 GSGASGTASSSACQHKDGGASKCRKCRECRECKRRVETEAMYCHLCSGLYHMDCHE---FTKNRQ 581
                                        |..|||....:.  |..|||.||:.|.:   .|..:.
Mouse   310 ----------------------------CAACKRGASLQP--CGTCSGAYHLSCLDPPLKTPPKG 344

  Fly   582 LMQLQNSRCPPCLR---EKDK 599
            |..     ||.|.|   :||:
Mouse   345 LWV-----CPKCQRKALKKDE 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lint-1NP_572692.1 PHD 548..593 CDD:214584 15/47 (32%)
Phf21bNP_001074635.2 PHA03247 <62..173 CDD:223021 37/144 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 196..229 7/35 (20%)
TNG2 <253..355 CDD:227367 32/164 (20%)
PHD_SF 309..351 CDD:473978 15/84 (18%)

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