Sequence 1: | NP_001285113.1 | Gene: | Lint-1 / 32055 | FlyBaseID: | FBgn0030274 | Length: | 602 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006538992.1 | Gene: | Chd5 / 269610 | MGIID: | 3036258 | Length: | 1955 | Species: | Mus musculus |
Alignment Length: | 532 | Identity: | 93/532 - (17%) |
---|---|---|---|
Similarity: | 162/532 - (30%) | Gaps: | 183/532 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 151 LSQDDDSGMPPLKLSELDENIPLMLAPPVRGLGQQIAAVKPEPEWLQGDEATVSVPPPPPQSKSK 215
Fly 216 LMKGSLDSTPAKRENISRSSPPPLAPITQTVVAELSQVPPSPQAESPPVNFHVVAQSRKNLQQAL 280
Fly 281 RRARKTKQQPRLFDDEEDLEITSLQNDRNKNR---------------------TSDGKGTPPSLE 324
Fly 325 PTNAAANQAAKKTIPQMSSQGMAKNNTAK----SKNTCRKSSPTPTSSGQSQPAVSSSGSSDDSS 385
Fly 386 AELQQEQQRRVASAAQWRDEPRESRTQPEEYGQETFLGLFELYSPEVLKKLSQRHSKRKRRTVQN 450
Fly 451 ASGVDFHYGQQLNAVDALVMGVRGQKKTKEKSEF---------LLSPTEKRLQANSKRTYTRKSK 506
Fly 507 SPD----------EISEKSSAGG---------------------GSGASGTASSSAC-------- 532
Fly 533 ------QHKDGGASKCRKCRE--------CRECKRRVETEAMYCHLCSGLYHMDCHEFTKNRQLM 583
Fly 584 QLQNSR--CPPC 593 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lint-1 | NP_001285113.1 | PHD | 548..593 | CDD:214584 | 15/46 (33%) |
Chd5 | XP_006538992.1 | CHDNT | 148..203 | CDD:369683 | 11/61 (18%) |
PHD1_CHD_II | 347..389 | CDD:277006 | 5/41 (12%) | ||
PHD2_CHD_II | 420..462 | CDD:277007 | 15/47 (32%) | ||
CD1_tandem_CHD3-4_like | 467..546 | CDD:349314 | |||
CD2_tandem_CHD3-4_like | 591..644 | CDD:349309 | |||
PLN03142 | 700..>1218 | CDD:215601 | |||
DUF1087 | 1300..1359 | CDD:368924 | |||
DUF1086 | 1393..1534 | CDD:368921 | |||
PRK13108 | <1535..1687 | CDD:237284 | |||
CHDCT2 | 1733..1904 | CDD:369684 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0383 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |