Sequence 1: | NP_001285113.1 | Gene: | Lint-1 / 32055 | FlyBaseID: | FBgn0030274 | Length: | 602 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017169944.1 | Gene: | Chd3 / 216848 | MGIID: | 1344395 | Length: | 2111 | Species: | Mus musculus |
Alignment Length: | 513 | Identity: | 92/513 - (17%) |
---|---|---|---|
Similarity: | 147/513 - (28%) | Gaps: | 182/513 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 107 LPDIAHEYVSAQVVPLIVDPNYKIMPQSVMARDTEEMLIRKHFLLSQDDDSGMPPLKLSELDENI 171
Fly 172 PLMLAPPVRGLGQQIAAVKPEPEWLQGDEATVSVPPPPPQSKSKLMKGSLDSTPAKRENISRSSP 236
Fly 237 PPLAPITQTVVAELSQVPPSPQAESPPVNFHVVAQSRKNLQQALRRARKTKQQPRLFDDEEDLEI 301
Fly 302 TSLQNDRNKNRTSDGKGTPPSLEPTNAAANQAAKKTIPQMSSQGMAKNNTAKSKNTCRKSSPTPT 366
Fly 367 S----SGQSQPAVSSSGSSDDS---SAELQQEQQRRVASAAQWRDEPRESRTQPEEYGQETFLGL 424
Fly 425 FELYSPEVLKKLSQRHSKRKRRTVQN---ASGVDFHYGQQLNAVDALVMGVRGQKKTKEKSEFLL 486
Fly 487 SPTEKR------LQANSKRTYTRKSKSPD--------EISEKSSAGGGSGASGTASSSACQHKDG 537
Fly 538 GASKCRKCRECRECKRRVETEAMYCHLCSGLYHMDCHEFTKNRQLMQLQNSR--CPPC 593 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lint-1 | NP_001285113.1 | PHD | 548..593 | CDD:214584 | 11/46 (24%) |
Chd3 | XP_017169944.1 | CHDNT | 200..253 | CDD:369683 | 10/66 (15%) |
PHD1_CHD_II | 434..476 | CDD:277006 | 9/48 (19%) | ||
PHD2_CHD_II | 510..552 | CDD:277007 | 14/53 (26%) | ||
CD1_tandem_CHD3-4_like | 557..635 | CDD:349314 | |||
CD2_tandem_CHD3-4_like | 680..734 | CDD:349309 | |||
PLN03142 | 771..>1325 | CDD:215601 | |||
DEXHc_CHD3 | 788..1019 | CDD:350813 | |||
DUF1087 | <1364..1407 | CDD:368924 | |||
DUF1086 | 1430..1569 | CDD:368921 | |||
PHA03169 | 1589..>1759 | CDD:223003 | |||
CHDCT2 | 1790..>1917 | CDD:369684 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0383 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |