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Protein Alignment Lint-1 and phf-32
DIOPT Version :9
Sequence 1: | NP_001285113.1 |
Gene: | Lint-1 / 32055 |
FlyBaseID: | FBgn0030274 |
Length: | 602 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001355360.1 |
Gene: | phf-32 / 184600 |
WormBaseID: | WBGene00008902 |
Length: | 208 |
Species: | Caenorhabditis elegans |
Alignment Length: | 80 |
Identity: | 20/80 - (25%) |
Similarity: | 27/80 - (33%) |
Gaps: | 28/80 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 525 GTASSSACQHKDG------GASKCRKCRE------CRECKRRVETEAMYCHLCSGLYHMD----- 572
|..||||....|. ..:||..|.: |..| .|.:...|.||..:.
Worm 9 GECSSSATSEPDDQNWLWPEQNKCGMCADGGTIIWCETC------PASFHAFCLGLKTIPEPEKD 67
Fly 573 ---CH--EFTKNRQL 582
|| :.:||.:|
Worm 68 TFICHRDKISKNNRL 82
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Lint-1 | NP_001285113.1 |
PHD |
548..593 |
CDD:214584 |
11/45 (24%) |
phf-32 | NP_001355360.1 |
PHD_SF |
32..71 |
CDD:389947 |
8/44 (18%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0383 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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