DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lint-1 and LOC1280404

DIOPT Version :10

Sequence 1:NP_572692.1 Gene:Lint-1 / 32055 FlyBaseID:FBgn0030274 Length:602 Species:Drosophila melanogaster
Sequence 2:XP_320251.4 Gene:LOC1280404 / 1280404 VectorBaseID:AGAMI1_013944 Length:697 Species:Anopheles gambiae


Alignment Length:749 Identity:180/749 - (24%)
Similarity:288/749 - (38%) Gaps:228/749 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KYYVLPLELKNDIIYCQRSLRDFLKVHA-LVSEVFDEQADADPVQMRRILDELEEEVYEINAEQQ 82
            |.:.:|:||...|||.||:|||.:..|. |.|::........|:..|.:| |||.|:..|..||:
Mosquito     9 KEFAMPVELLQSIIYLQRALRDCVIQHQFLASKINILAMHQRPIIKRHML-ELEREILSIGREQE 72

  Fly    83 FLLLRLNDSLQEFSVKLK-ENNIMFLPDIAHEYVSAQVVPL--IVDPNYKIMPQSVMARDTEEML 144
            .::.:|::.::.|.:.:: :..:....||...|||..:...  :.|.|..: |:.:..|.:...|
Mosquito    73 GVVRQLSERVKRFQMTVQSQRKVALSEDIVCGYVSRHLAAFNDVTDLNGTV-PKHISPRLSAAEL 136

  Fly   145 IRKH---FLLSQDDDSGM----PPLKLSEL---DEN----------------------------- 170
            .:|:   .||:.::|..:    ..:.|.::   |.|                             
Mosquito   137 AQKYSLETLLAANEDLAVVVTHEKIDLEDVERRDSNHTDNAQWDTVLCIAEGKRKNKHTVARNCL 201

  Fly   171 IPLMLAPPV-------------------RGLGQQ----IAAVKPE-------------------- 192
            .||:.|.||                   .|:..|    |||||.|                    
Mosquito   202 KPLVTAQPVGRAQAPSTDSSITIEERPFAGIADQKPPPIAAVKAEKQEDVDQEEEEESEVDVDEE 266

  Fly   193 --------PEWLQGDEATV---SVPPPP----------PQSKSKLMKGSLDSTPAKRENIS---- 232
                    ||....|||..   ||....          |..:.:..|||...:.||:..|.    
Mosquito   267 DGQDSLLTPEKTSEDEAEADGKSVQSMDQSVGNRASWMPGLRGRPPKGSKYVSIAKQAAIEARRM 331

  Fly   233 -------------RSSPPPLAP-ITQTVVAE----LSQVPPSP----------QAESPP--VNFH 267
                         :..|||..| |.|..|::    ||:....|          :.|.|.  :|..
Mosquito   332 ANAEQQQQQRQQMQQPPPPAQPTIIQRRVSKRKDVLSEKVEEPIELDVSGNEEEEEEPTELMNTA 396

  Fly   268 VVAQSRKNLQQALRRARKTKQQPRLFDDEEDLEITSLQNDRNKNRTSDGKGTPPSLEPTNAAANQ 332
            .|.:.|.||.|||.:.::...:|       ::|::.:.|.:..::.  |.|..|           
Mosquito   397 AVRRGRSNLLQALNKQKRGSGRP-------NMEVSVISNQQKSSKR--GAGPIP----------- 441

  Fly   333 AAKKTIPQMS--SQGMAKNNTAKSKNTCRKSSPTPTSSGQSQPAVSSSGSSDDSSAELQQEQQRR 395
            ...|.:..:|  |.|.:.|:          .|.|||..|:.        :|::||       .||
Mosquito   442 GGSKLVKHLSEGSSGSSSNS----------RSSTPTWPGRH--------TSEESS-------DRR 481

  Fly   396 VASAAQW-----RDEPRESR-TQPEEYGQETFLGLFELYSPEVLKKLSQRHSKRKRRTVQNASGV 454
            .:.:|::     ..||.|.| |...|..|.|||..|:::.||.:|.:.:|.|:||||:..:....
Mosquito   482 SSPSAEFPALPDPGEPVEPRPTSISEMEQRTFLRYFQIFLPEEVKAMKERKSERKRRSCYSTERK 546

  Fly   455 DFHYG--------QQLNAVDALVMGVRGQKKTKEKSEFLLSP---TEKRLQANSKRTYTRKSKSP 508
            |||||        ||..|       .|..|:|.:: ..|.||   ..||.:........|    |
Mosquito   547 DFHYGKLDYYEQQQQYQA-------ARASKRTHQR-PILYSPPVAVAKRRRPPPPPAPLR----P 599

  Fly   509 DEISEKSSAGGGSGASGTASSSACQHKDGGAS-----KCRKCRECRECKRRVETEAM-YCHLCSG 567
            ..::..::|.|||| |.||.:||.:.:...|:     .....|.|..|.:...||.: .|..|..
Mosquito   600 QPLAAAAAAAGGSG-STTARTSAGRPRPQPATVTNIFAAMDKRTCFVCSKSGTTEELSACMNCYN 663

  Fly   568 LYHMDCHEFTKNRQLMQLQNSRCPPCL--REKDK 599
            :||::||:..:..:..:.::..||.||  .|:||
Mosquito   664 IYHLNCHKIDEQSEAYRQRDDLCPVCLISDEQDK 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lint-1NP_572692.1 PHD 548..593 CDD:214584 12/45 (27%)
LOC1280404XP_320251.4 None

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