Sequence 1: | NP_001285113.1 | Gene: | Lint-1 / 32055 | FlyBaseID: | FBgn0030274 | Length: | 602 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_033776.1 | Gene: | Aire / 11634 | MGIID: | 1338803 | Length: | 552 | Species: | Mus musculus |
Alignment Length: | 585 | Identity: | 126/585 - (21%) |
---|---|---|---|
Similarity: | 190/585 - (32%) | Gaps: | 171/585 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 63 MRRILDELEEEVYEINAEQQFLLLRL--------NDSLQEFSVKLKENNIMFLPDIAHEYVSAQV 119
Fly 120 VPLIVDPNYKIMP-QSVMARDTE-EMLIRKHFLLSQDDDSGMPPLKLSELDENIPLMLAPPVRGL 182
Fly 183 GQQIAAVKPEPEWLQGDEATVSVPPPPPQSKSKLMKGSLDSTPAKRENISRSSP-------PPLA 240
Fly 241 PI-------------TQTVVAELSQVPPSPQAESPPVNFHVVAQSRKNLQQALRRARKTK----- 287
Fly 288 ---QQPRLFDDEEDLEITSLQNDRNKNRTSDGKGTPPSLEPTNAAANQAAKKTIPQMSSQGMAKN 349
Fly 350 NTAKSKNTCRKSSPTPTSSGQSQPAVSSSGSSDDSSAELQQEQQRRVASAAQWRDEPRESRTQPE 414
Fly 415 EYGQETFLGLFEL--YSP---EVLKKLSQRHSKRKRRTVQNASGVDFHYGQQLNAVDALVMGVR- 473
Fly 474 GQKKTKEKSEFLLSPTEKRLQANSKRTYTRKS----------KSPDEISEKSSAGGGSGASGTAS 528
Fly 529 SSACQHKDGGASKCRKCRECRECKRRVETEAMYCHLCSGLYHMDCHEFTKNRQLMQLQNSRCPPC 593
Fly 594 593 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lint-1 | NP_001285113.1 | PHD | 548..593 | CDD:214584 | 11/44 (25%) |
Aire | NP_033776.1 | LXXLL motif 1 | 8..12 | 2/3 (67%) | |
Sp100 | 17..103 | CDD:281203 | 21/101 (21%) | ||
LXXLL motif 2 | 64..68 | 1/7 (14%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 109..177 | 22/73 (30%) | |||
Nuclear localization signal. /evidence=ECO:0000255 | 114..134 | 11/25 (44%) | |||
SAND | 198..264 | CDD:128554 | 17/83 (20%) | ||
PHD1_AIRE | 300..342 | CDD:277014 | 9/62 (15%) | ||
LXXLL motif 3 | 414..418 | 0/3 (0%) | |||
PHD2_AIRE | 433..475 | CDD:277015 | 13/61 (21%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 472..514 | 2/4 (50%) | |||
LXXLL motif 4 | 520..524 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0383 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |