| Sequence 1: | NP_001285113.1 | Gene: | Lint-1 / 32055 | FlyBaseID: | FBgn0030274 | Length: | 602 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_005256484.1 | Gene: | CHD3 / 1107 | HGNCID: | 1918 | Length: | 2115 | Species: | Homo sapiens |
| Alignment Length: | 508 | Identity: | 92/508 - (18%) |
|---|---|---|---|
| Similarity: | 172/508 - (33%) | Gaps: | 128/508 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 35 QRSLRDFLKVHALVSEVFDEQADA------------DPVQMRRILDELEEEVYEINAEQQFLLLR 87
Fly 88 LNDSLQEFSVK---LKENNIMFLPDIAHEYVSAQVVPLIVDPNYKIMPQSVMARDTEEMLIRKHF 149
Fly 150 LLSQDDDSGMPPLKLSELDENIPLMLAPPVRGLGQQIAAVKPEPEWLQGDEATVSVPPPPPQSKS 214
Fly 215 KLMKGS------LDSTPAKRENISR----SSPPPLAPITQTVVAELSQVPPSPQAESPPVN---- 265
Fly 266 FHVVAQSRKNLQQALRRAR-KTKQQPRLFDDEEDLEITSLQNDRNKNRTSDGKGTPPSLEPTNAA 329
Fly 330 ANQ----------AAKKTIPQM-------SSQGMAKNNTAKSKNTCRKSSPTPTSSGQSQPAVSS 377
Fly 378 SGSSDDSSAELQQEQQRRVASAAQWRDEPRESRTQPEEYGQ-----ETFLGLFELYSPEVLKKLS 437
Fly 438 QRHSKRKRRTVQNASGV-------DFHYGQQLNAVDALVMGVRGQKKTKEKSE 483 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Lint-1 | NP_001285113.1 | PHD | 548..593 | CDD:214584 | |
| CHD3 | XP_005256484.1 | CHDNT | 207..259 | CDD:285335 | |
| PHD1_CHD_II | 440..482 | CDD:277006 | |||
| PHD2_CHD_II | 517..559 | CDD:277007 | |||
| CHROMO | 568..644 | CDD:214605 | |||
| CHROMO | 692..744 | CDD:214605 | |||
| SNF2_N | 798..1094 | CDD:278600 | |||
| DEXDc | 815..973 | CDD:238005 | |||
| MPH1 | <938..1317 | CDD:224036 | 7/37 (19%) | ||
| Helicase_C | 1118..1233 | CDD:278689 | |||
| DUF1087 | <1371..1415 | CDD:283996 | 15/75 (20%) | ||
| DUF1086 | 1437..1576 | CDD:283992 | 24/146 (16%) | ||
| CHDCT2 | 1796..>1923 | CDD:285336 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E2759_KOG0383 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||