DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CDK2AP1 and Cdk2ap2

DIOPT Version :10

Sequence 1:NP_001259439.1 Gene:CDK2AP1 / 32050 FlyBaseID:FBgn0030269 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001102968.1 Gene:Cdk2ap2 / 688405 RGDID:1588883 Length:127 Species:Rattus norvegicus


Alignment Length:136 Identity:58/136 - (42%)
Similarity:71/136 - (52%) Gaps:29/136 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 SSNGGQRNSGAGVSSTSSGSNGQSMGLNLSSSQLKYPPPSTSPVVVTTQTSANITTPLTSTASLP 218
            ||..|....|.|....::||               .|.||.|     ...:|....||.:....|
  Rat    11 SSTPGSSTPGPGTPVPTAGS---------------VPSPSGS-----VPGAAAPFRPLFNDFGPP 55

  Fly   219 SVG-------PGN--GLTKYAQLLAVIEEMGRDIRPTYTGSRSSTERLKRGIVHARILVRECLME 274
            |:|       ||:  ..:.|..||:||||||::|||||.||:|:.|||||||:|||.||||||.|
  Rat    56 SMGYVQAMKPPGSQGSQSTYTDLLSVIEEMGKEIRPTYAGSKSAMERLKRGIIHARALVRECLAE 120

  Fly   275 TERAAR 280
            |||.||
  Rat   121 TERNAR 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDK2AP1NP_001259439.1 CDK2AP 1..280 CDD:430840 56/134 (42%)
Cdk2ap2NP_001102968.1 rad23 <5..>107 CDD:273167 41/115 (36%)
CDK2AP <65..126 CDD:430840 39/60 (65%)

Return to query results.
Submit another query.