DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CDK2AP1 and CDK2AP1

DIOPT Version :10

Sequence 1:NP_001259439.1 Gene:CDK2AP1 / 32050 FlyBaseID:FBgn0030269 Length:295 Species:Drosophila melanogaster
Sequence 2:XP_001688361.2 Gene:CDK2AP1 / 5667628 VectorBaseID:AGAMI1_001206 Length:188 Species:Anopheles gambiae


Alignment Length:284 Identity:100/284 - (35%)
Similarity:132/284 - (46%) Gaps:99/284 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDIMDIQAVESKLSDVTVTPIPRSQVQNFYNYQQQREQREQQPQIQISAIHHSRGSVGGGGGSNS 65
            ||.:|||||||||:||||||||  .::|.:.                   :||.    |||.|:|
Mosquito     1 MDYVDIQAVESKLTDVTVTPIP--MIKNAHT-------------------NHST----GGGSSSS 40

  Fly    66 SNAATDYS---TSSGGKRERDRSSASDYSSSSSKQSSAAAANAAAAAAAVAALQYSPQFLQAQLA 127
            ||...:::   |.:.....|:..:.|::...||...:....::.|.|..|.              
Mosquito    41 SNYGANHTANITITPQVNHRNSHNNSNHHHHSSVSGAVNDGSSGALALTVG-------------- 91

  Fly   128 LLQQQSNTTATPAAVAAAALSLANMCSSNGGQRNSGAGVSSTSSGSNGQSMGLNLSSSQLKYPPP 192
                                  :|..:||....||       ||.||..|               
Mosquito    92 ----------------------SNHSNSNNNNANS-------SSSSNNNS--------------- 112

  Fly   193 STSPVVVTTQTSANITTPLTSTASLPSVGPGNGLTKYAQLLAVIEEMGRDIRPTYTGSRSSTERL 257
                      ::||:..|:|:....|:   ..||:||||||.||||||||:||||:|||:|.|||
Mosquito   113 ----------SAANLVAPVTTFNQFPN---NAGLSKYAQLLMVIEEMGRDLRPTYSGSRNSAERL 164

  Fly   258 KRGIVHARILVRECLMETERAARQ 281
            ||.||||||||||||:||||:|||
Mosquito   165 KRLIVHARILVRECLVETERSARQ 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDK2AP1NP_001259439.1 CDK2AP 1..280 CDD:430840 97/281 (35%)
CDK2AP1XP_001688361.2 CDK2AP 1..187 CDD:430840 47/188 (25%)

Return to query results.
Submit another query.