DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CDK2AP1 and cdk2ap2

DIOPT Version :10

Sequence 1:NP_001259439.1 Gene:CDK2AP1 / 32050 FlyBaseID:FBgn0030269 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001005139.1 Gene:cdk2ap2 / 448723 XenbaseID:XB-GENE-6257813 Length:121 Species:Xenopus tropicalis


Alignment Length:115 Identity:56/115 - (48%)
Similarity:71/115 - (61%) Gaps:26/115 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 PPPSTS------PV---VVTTQTSA-NITT--PLTSTASLPSVG--PG----------NGLTKYA 230
            |.||.|      ||   .|::.:.| :::|  |:.|....||:|  ||          .|  .|:
 Frog     8 PAPSGSNSAPGTPVPGAAVSSPSGAHSVSTFRPIFSDFGPPSMGFIPGVKPAVSQAVSQG--TYS 70

  Fly   231 QLLAVIEEMGRDIRPTYTGSRSSTERLKRGIVHARILVRECLMETERAAR 280
            .||:||||||::|||||.||:|:.|||||||:|||.||||||.||||.||
 Frog    71 DLLSVIEEMGKEIRPTYAGSKSAMERLKRGIIHARALVRECLAETERNAR 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDK2AP1NP_001259439.1 CDK2AP 1..280 CDD:430840 54/113 (48%)
cdk2ap2NP_001005139.1 CDK2AP <68..120 CDD:430840 37/51 (73%)

Return to query results.
Submit another query.