DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp10A and RGD1559908

DIOPT Version :9

Sequence 1:NP_001285109.1 Gene:Klp10A / 32049 FlyBaseID:FBgn0030268 Length:805 Species:Drosophila melanogaster
Sequence 2:XP_038952347.1 Gene:RGD1559908 / 364670 RGDID:1559908 Length:557 Species:Rattus norvegicus


Alignment Length:605 Identity:318/605 - (52%)
Similarity:407/605 - (67%) Gaps:86/605 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ITVGQSVKIKRTDGRVHMAVVAVINQSGKCITVEWYERGETKGKEVELDAILTLNPELMQDTVEQ 68
            |.:|..|:|||:|||:|.|:|..:|:..:.:||||.|.|:|||||::|::|.:|||:|:.|    
  Rat     9 IQIGIYVEIKRSDGRIHQAMVTSLNEDNESVTVEWIENGDTKGKEIDLESIFSLNPDLVPD---- 69

  Fly    69 HAAPEPKKQATAPMNLSRNPTQSAIGGNLTSRMTMAGNMLNKIQESQSIPNPIVSS--NSVNTNS 131
                                                    ..|:.|..||.|..||  |.:..|.
  Rat    70 ----------------------------------------EDIEPSPEIPPPSSSSKVNKIVKNR 94

  Fly   132 NSNTTAGGGGGTTTSTTTGLQRPRYSQAATGQQQTRIASAVPNNTLPNPSAAASAGPAAQGVATA 196
            .:..:.........:...|..|.|.||                  ||..|::|...         
  Rat    95 RTVASIKNDPPPRDNRVVGSARARPSQ------------------LPEQSSSAQQN--------- 132

  Fly   197 ATTQGAGGASTRRSHALKEVERLKENREKRRARQAEMKEEKVALMNQDPGNPNWETAQMIREYQS 261
                     :.|:|:.:||||:|:|.|||||.:|.|::|::.  .:.|..|||:|...|||:::.
  Rat   133 ---------ARRKSNCVKEVEKLQEKREKRRLQQQELREKRA--QDVDATNPNYEIMCMIRDFRG 186

  Fly   262 TLEFVPLLDGQAVDDHQITVCVRKRPISRKEVNRKEIDVISVPRKDMLIVHEPRSKVDLTKFLEN 326
            :|::.||.....:|:|:|.|||||||:::||...|::|||::|.||:::||||:.|||||::|||
  Rat   187 SLDYRPLTTADPIDEHRICVCVRKRPLNKKETQMKDLDVITIPSKDVVMVHEPKQKVDLTRYLEN 251

  Fly   327 HKFRFDYAFNDTCDNAMVYKYTAKPLVKTIFEGGMATCFAYGQTGSGKTHTMGGEFNGKVQDCKN 391
            ..|||||||:|:..|.|||::||:|||:||||.|||||||||||||||||||||:|:||.|||..
  Rat   252 QTFRFDYAFDDSAPNEMVYRFTARPLVETIFERGMATCFAYGQTGSGKTHTMGGDFSGKNQDCSK 316

  Fly   392 GIYAMAAKDVFVTLNMPRYRAMNLVVSASFFEIYSGKVFDLLSDKQKLRVLEDGKQQVQVVGLTE 456
            ||||:||:|||:.|..|.|:.:.|.|.|:|||||||||||||:.|.|||||||||||||||||.|
  Rat   317 GIYALAARDVFLMLKKPNYKKLELQVYATFFEIYSGKVFDLLNRKTKLRVLEDGKQQVQVVGLQE 381

  Fly   457 KVVDGVEEVLKLIQHGNAARTSGQTSANSNSSRSHAVFQIVLRPQGSTKIHGKFSFIDLAGNERG 521
            :.|..||:|||||..||:.|||||||||::||||||||||:||.:|  |:|||||.|||||||||
  Rat   382 REVKYVEDVLKLIDIGNSCRTSGQTSANAHSSRSHAVFQIILRRKG--KLHGKFSLIDLAGNERG 444

  Fly   522 VDTSSADRQTRMEGAEINKSLLALKECIRALGKQSAHLPFRVSKLTQVLRDSFIGEKSKTCMIAM 586
            .|.||||||||:||||||||||||||||||||:...|.|||.||||||||||||||.|:|||||.
  Rat   445 ADMSSADRQTRLEGAEINKSLLALKECIRALGRNKPHTPFRASKLTQVLRDSFIGENSRTCMIAT 509

  Fly   587 ISPGLSSCEHTLNTLRYADR 606
            ||||::|||:||||||||:|
  Rat   510 ISPGMASCENTLNTLRYANR 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp10ANP_001285109.1 KISc_KIF2_like 278..608 CDD:276818 240/329 (73%)
Kinesin 284..609 CDD:278646 236/323 (73%)
RGD1559908XP_038952347.1 KISc_KIF2_like 203..529 CDD:276818 239/327 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D202066at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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