DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klp10A and CG5004

DIOPT Version :10

Sequence 1:NP_572687.1 Gene:Klp10A / 32049 FlyBaseID:FBgn0030268 Length:805 Species:Drosophila melanogaster
Sequence 2:NP_573195.1 Gene:CG5004 / 32698 FlyBaseID:FBgn0260748 Length:1247 Species:Drosophila melanogaster


Alignment Length:341 Identity:69/341 - (20%)
Similarity:113/341 - (33%) Gaps:118/341 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QSVKIKRTDGRVHMAVVAVINQ--SGKCITVEWY---ERGETKGKEVELDAILTLNPELMQDTVE 67
            ||::||:...:   .:.|::.|  :..|:..|..   |..|:..|..|     .|..:..::..|
  Fly   648 QSIEIKQDQLK---KLRAMLKQKPNNACLKEELQLVCESLESDRKTFE-----DLEFQYFEEESE 704

  Fly    68 QHAAPEPKKQ---------ATAPMNLSRNPTQSAIGGNLTSRMTMAGNMLNKIQESQSI------ 117
            .||:.|..|:         ..|.:.:...|.:.. .|:.||..:...|::|.:. |||:      
  Fly   705 HHASHEEFKRQEQRLMLEAELAALRIQIGPDEEE-PGSPTSPGSTGSNLVNGVM-SQSLFGSAEL 767

  Fly   118 ------PNPIVSSNSVNTN--------SNSNT----------TAGGGGGTTTSTTTGLQRPRYSQ 158
                  ....:.|.|||.|        :|::|          ...||.....|....||..|:  
  Fly   768 LCPKRRNQEDLMSKSVNENMFYNHKIEANTSTPKRLPLQLFEDLAGGSCEQISFNLSLQGDRF-- 830

  Fly   159 AATGQQQTRIASAVPNNTLPNPSAAASAGPAAQGVATAATTQGAGGASTRRSHALKEVER----- 218
                 :...:...||:....:.|..         ||..|....:.||||:...::.|:||     
  Fly   831 -----EVNPLERRVPSQDDIDRSCK---------VANDAPISASQGASTKIFDSIMEIERNRKLL 881

  Fly   219 --------LKENREK------------------------RRARQAEMKE---------EKVAL-- 240
                    ::..|:|                        .:.||.|...         ||..|  
  Fly   882 LAQQGHQVIEHERQKMYDLKKKSHDEARTQYLLSTQQSMEQQRQLESDANGGKDAKLFEKTELQK 946

  Fly   241 MNQDPGNPNWETAQMI 256
            :||.||.|..:..|.|
  Fly   947 LNQKPGEPVDDQVQKI 962

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp10ANP_572687.1 KISc_KIF2_like 278..608 CDD:276818
CG5004NP_573195.1 FHA_PHLB1 1..122 CDD:438765
SMC_N <570..730 CDD:481474 19/89 (21%)
Caldesmon <664..801 CDD:460421 30/143 (21%)
PH-like 1142..1242 CDD:473070
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.