DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt3 and AT1G53780

DIOPT Version :10

Sequence 1:NP_572686.1 Gene:Rpt3 / 32047 FlyBaseID:FBgn0028686 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_001185217.1 Gene:AT1G53780 / 841815 AraportID:AT1G53780 Length:620 Species:Arabidopsis thaliana


Alignment Length:446 Identity:176/446 - (39%)
Similarity:243/446 - (54%) Gaps:56/446 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PYNM-------------------DVLIPEKDELSDLKLKD------AHSSLDELDMEDLYVRYKK 41
            |:||                   |::..:..|.|:..|.|      ..:|....:.|....|.||
plant   170 PHNMRSDFEPLLSVLRLRDYETGDIIEFDSTEASEEALSDITEFGSTEASEAHFEQEPYSARIKK 234

  Fly    42 LQKTLEFIEVQEEY----IKD--------EQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQN 94
            ::|  |..|:.|:.    ||:        .|.:|..:....|||      .||::....:.:..|
plant   235 VEK--EINELAEKICNLGIKESDTGLAPPNQWDLVSDKQMMQEE------QPLLVATCTQIISPN 291

  Fly    95 TG----IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQPDEKP 155
            |.    :|.......|.|.:........::....|.:.:....:...|||:.|.|::|:..:|||
plant   292 TEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKP 356

  Fly   156 DVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTA 220
            |.:|:||||...|.::|||.||||:.|.|.:.::|||||:|||.|||||.|||::|:|||:.|.|
plant   357 DATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGA 421

  Fly   221 SFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILL 285
            .||||||||.||||:|||.||||::|::|:.....|:|.||||||...|||...|:|.||||.:|
plant   422 CFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTML 486

  Fly   286 ELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLS 350
            |:|.|:||||...|:||:|||||.|.||||||||||||||:||.|||...:..:|...|..|:..
plant   487 EILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCE 551

  Fly   351 EDVDLEEFVARPDKISGADINAICQEAGMHAVRENRYIVLAKDF-------EKGYK 399
            .|:..|.........:||||.::|.||||:|:...|..|..|||       .|||:
plant   552 RDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKVVKGYQ 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt3NP_572686.1 PTZ00454 22..413 CDD:240423 169/407 (42%)
AT1G53780NP_001185217.1 cyclophilin <4..95 CDD:469651
PRK03992 278..616 CDD:179699 152/330 (46%)
Blue background indicates that the domain is not in the aligned region.

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