Protein Alignment Rpt3 and Psmc5

DIOPT Version :9

• Sequence 1: NP_001285108.1
• Gene: Rpt3 / 32047
• FlyBaseID: FBgn0028686
• Length: 413
• Species: Drosophila melanogaster
• Sequence 2: NP_112411.1
• Gene: Psmc5 / 81827
• RGDID: 708376
• Length: 406
• Species: Rattus norvegicus
• Alignment Length: 412
• Identity: 174/412 - (42%)
• Similarity: 253/412 - (61%)
• Gaps: 31/412 - (7%)

  Fly    10 PEKDELSDLKLKDAHSSLDELDMEDLYVRYKKLQKTLEFIEVQEEYIKDEQRNLKKEYLHAQ--- 71
            ||:.||.:.|   |.|.|              .|..|..||..:..:.|:.:||::  |.||
  Rat     6 PEQMELEEGK---AGSGL--------------RQYYLSKIEELQLIVNDKSQNLRR--LQAQRNE 51

  Fly    72 ---------EEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVAL 127
                     ||::.:|.....:|:.:.|:|:...:|.......:.|.:...||...:.|:..|||
  Rat    52 LNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVAL 116

  Fly   128 HKHSNALVDVLPPEADSSISMLQPDEKPDVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGID 192
            ...|..|..:||.:.|..:|::..::.||.:|..|||:|.|.:||:|.:|||:.|.||::.:||.
  Rat   117 RNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIA 181

  Fly   193 PPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAII 257
            .|:|||:|||||.|||:||:||||||..:||||.|||.|||::|||.||||::|.:|:|:||:||
  Rat   182 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSII 246

  Fly   258 FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRL 322
            |:||||:|.:.|.:..:|.|.||||.:||||||:|||:.|.|:||||||||.|.||.|||||||:
  Rat   247 FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRI 311

  Fly   323 DRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLEEFVARPDKISGADINAICQEAGMHAVRENRY 387
            |||||||.|:...:..:....:.||||:..::|.:........|||::..:|.||||:|:||.|.
  Rat   312 DRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRV 376

  Fly   388 IVLAKDFEKGYKNNIKKDEQEH 409
            .|..:|||......::||.:::
  Rat   377 HVTQEDFEMAVAKVMQKDSEKN 398

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt3	NP_001285108.1	PTZ00454	22..413	CDD:240423	169/400 (42%)
		AAA	197..330	CDD:278434	90/132 (68%)
Psmc5	NP_112411.1	RPT1	4..404	CDD:224143	174/412 (42%)
		May mediate interaction with PRPF9. /evidence=ECO:0000250|UniProtKB:P62196	186..406		115/213 (54%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920