Protein Alignment Rpt3 and Psmc6

DIOPT Version :9

• Sequence 1: NP_001285108.1
• Gene: Rpt3 / 32047
• FlyBaseID: FBgn0028686
• Length: 413
• Species: Drosophila melanogaster
• Sequence 2: NP_080235.2
• Gene: Psmc6 / 67089
• MGIID: 1914339
• Length: 389
• Species: Mus musculus
• Alignment Length: 377
• Identity: 159/377 - (42%)
• Similarity: 241/377 - (63%)
• Gaps: 6/377 - (1%)

  Fly    39 YKKLQKTLEFIEV--QEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGST 101
            |:|  |.||..|:  :.:.::::.:.|.|:|..::.::|.:|||..::|:.|:.:.:...||.:|
Mouse    12 YRK--KLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKAT 74

  Fly   102 TGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQPDEKPDVSYADIGGMD 166
            .|..|.|.....:|:..|||...|||...:..::..||.|.|..:..:..::..:|||::|||:.
Mouse    75 NGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLS 139

  Fly   167 MQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFV 231
            .|.:|:||.:|||||:.||::::||.||:|.|:|||||.|||:||:|||.....:|::||.|..|
Mouse   140 EQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIV 204

  Fly   232 QKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ 296
            .||:||..|::|::|..|:::.|.|||:||||||..:||...|.||||:||.|:||||||||||.
Mouse   205 DKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 269

  Fly   297 TTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLEEFVAR 361
            ...||:||||||.|||||||||||||||||...||:.:.:..:.......:....::|.|..|..
Mouse   270 LHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKL 334

  Fly   362 PDKISGADINAICQEAGMHAVRENRYIVLAKDFEKGYKN--NIKKDEQEHEF 411
            .|..:|||:..:|.||||.|:|.:...|:.:||.|..:.  :.||.|.:.::
Mouse   335 SDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 386

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt3	NP_001285108.1	PTZ00454	22..413	CDD:240423	159/377 (42%)
		AAA	197..330	CDD:278434	82/132 (62%)
Psmc6	NP_080235.2	RPT1	4..387	CDD:224143	159/377 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1222
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820