Protein Alignment Rpt3 and psmc6

DIOPT Version :10

• Sequence 1: NP_572686.1
• Gene: Rpt3 / 32047
• FlyBaseID: FBgn0028686
• Length: 413
• Species: Drosophila melanogaster
• Sequence 2: NP_989342.1
• Gene: psmc6 / 394968
• XenbaseID: XB-GENE-978099
• Length: 389
• Species: Xenopus tropicalis
• Alignment Length: 382
• Identity: 162/382 - (42%)
• Similarity: 243/382 - (63%)
• Gaps: 8/382 - (2%)

  Fly    38 RYKKLQ----KTLEFIEV--QEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTG 96
            |.|.||    |.||..|:  :.:.::::.:.|.|:|..::.::|.:|||..::|:.|:.:.:...
 Frog     5 REKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKF 69

  Fly    97 IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQPDEKPDVSYAD 161
            ||.:|.|..|.|.....:|:..|||...|||...:..::..||.|.|..:..:..::..:|||::
 Frog    70 IVKATNGPRYVVGCRRQLDKTKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSE 134

  Fly   162 IGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVV 226
            |||:..|.:|:||.:|||||:.||::::||.||:|.|:|||||.|||:||:|||.....:|::||
 Frog   135 IGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVV 199

  Fly   227 GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQM 291
            .|..|.||:||..|::|::|..|:::.|.|||:||||||..:||...|.||||:||.|:||||||
 Frog   200 SSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQM 264

  Fly   292 DGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLE 356
            ||||....||:||||||.|||||||||||||||||...||:.:.:..:.......:....::|.|
 Frog   265 DGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQARLDILKIHAGPITKHGEIDYE 329

  Fly   357 EFVARPDKISGADINAICQEAGMHAVRENRYIVLAKDFEKGYKN--NIKKDEQEHEF 411
            ..|...|..:|||:..:|.||||.|:|.:|..|:.:||.|..:.  :.||.|.:.::
 Frog   330 AIVKLSDGFNGADLRNVCTEAGMFAIRADRDFVVQEDFMKAVRKVADSKKLESKLDY 386

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt3	NP_572686.1	PTZ00454	22..413	CDD:240423	162/382 (42%)
psmc6	NP_989342.1	PRK03992	5..379	CDD:179699	159/373 (43%)