Protein Alignment Rpt3 and psmc2

DIOPT Version :9

• Sequence 1: NP_001285108.1
• Gene: Rpt3 / 32047
• FlyBaseID: FBgn0028686
• Length: 413
• Species: Drosophila melanogaster
• Sequence 2: NP_989155.1
• Gene: psmc2 / 394760
• XenbaseID: XB-GENE-1000016
• Length: 433
• Species: Xenopus tropicalis
• Alignment Length: 420
• Identity: 163/420 - (38%)
• Similarity: 230/420 - (54%)
• Gaps: 74/420 - (17%)

  Fly    54 EYIKDEQRNLKKEYLHAQEEVKRIQS-----VPLV------------------IGQFLEAVDQNT 95
            :|:..:||..|:|    ::|.|.|:|     :.|:                  |.|.|:.:::.|
 Frog     3 DYLGADQRKTKEE----EKEDKPIRSLDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELT 63

  Fly    96 GIVGSTTG--------------------SNYYVRILSTIDRELLKPSASVALHKHSNALVDV--- 137
            ||..|.||                    .....|....|:.:...|...:.:.:.:..:||:
 Frog    64 GIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQ 128

  Fly   138 ------------------------LPPEADSSISMLQPDEKPDVSYADIGGMDMQKQEIREAVEL 178
                                    |||:.|.:::|:|.:|||||:|:|:||...|.:::||.||.
 Frog   129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVET 193

  Fly   179 PLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVR 243
            ||.|.|.:..:||:||:|||::||||.|||:.|:|||:.|.|.||||:|||.||||:|||.||||
 Frog   194 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVR 258

  Fly   244 DVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNR 308
            ::|.:|:.....:||.||||||...|||...|.|.||||.:|||:||:||||...|:||:|||||
 Frog   259 ELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNR 323

  Fly   309 ADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLEEFVARPDKISGADINAI 373
            .|||||||:|||||||||||.|||...:..:|......|::..|:..|.........:||:|.::
 Frog   324 PDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSV 388

  Fly   374 CQEAGMHAVRENRYIVLAKDFEKGYKNNIK 403
            |.||||.|:|..|.:...|||.:.....||
 Frog   389 CTEAGMFAIRARRKVATEKDFLEAVNKVIK 418

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt3	NP_001285108.1	PTZ00454	22..413	CDD:240423	163/420 (39%)
		AAA	197..330	CDD:278434	87/132 (66%)
psmc2	NP_989155.1	RPT1	33..430	CDD:224143	153/386 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010