DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt3 and Rpt6

DIOPT Version :9

Sequence 1:NP_001285108.1 Gene:Rpt3 / 32047 FlyBaseID:FBgn0028686 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_608447.1 Gene:Rpt6 / 33105 FlyBaseID:FBgn0020369 Length:405 Species:Drosophila melanogaster


Alignment Length:399 Identity:167/399 - (41%)
Similarity:252/399 - (63%) Gaps:23/399 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 DELDMEDLY-----VRYKKLQKTLEFIEVQEEYIKDEQRNLKKEYLHAQ------------EEVK 75
            :.:::|..|     .|...:||    ||..:..:.::.:||::  |.||            ||::
  Fly     5 NRMEIESAYHKGEGFRSYYIQK----IEELQLVVAEKHQNLRR--LQAQRNELNAKVRMLREELQ 63

  Fly    76 RIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPP 140
            .:|.....:|:.::.:|:...:|.......:.|.:...||...:.|:..|||...|..|..:||.
  Fly    64 LLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPN 128

  Fly   141 EADSSISMLQPDEKPDVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGC 205
            :.|..:|::..::.||.:|..:||:|.|.:||:|.:|||:.|.||:..:||..|:|||:|||||.
  Fly   129 KVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 193

  Fly   206 GKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRF 270
            |||:||:||||||..:||||.|||.|||::|||.||||::|.:|:|:||:|||:||||:|.:.|.
  Fly   194 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRI 258

  Fly   271 DAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 335
            ::.:|.|.||||.:||||||:|||:.|.|:||||||||.|.||||||||||:|||||||.|:...
  Fly   259 ESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEA 323

  Fly   336 KRLVFSTITSKMNLSEDVDLEEFVARPDKISGADINAICQEAGMHAVRENRYIVLAKDFEKGYKN 400
            :..:....:.||||:..::|.:........|||::..:|.||||:|:||.|..|..:|||.....
  Fly   324 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAK 388

  Fly   401 NIKKDEQEH 409
            .::||.:::
  Fly   389 VMQKDSEKN 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt3NP_001285108.1 PTZ00454 22..413 CDD:240423 167/399 (42%)
AAA 197..330 CDD:278434 91/132 (69%)
Rpt6NP_608447.1 RPT1 17..403 CDD:224143 165/387 (43%)
SlyX <27..>69 CDD:294687 10/43 (23%)
AAA_16 152..>205 CDD:289934 31/52 (60%)
AAA 185..317 CDD:278434 90/131 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445449
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D298123at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23073
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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