Protein Alignment Rpt3 and psmc3

DIOPT Version :9

• Sequence 1: NP_001285108.1
• Gene: Rpt3 / 32047
• FlyBaseID: FBgn0028686
• Length: 413
• Species: Drosophila melanogaster
• Sequence 2: XP_005169019.1
• Gene: psmc3 / 321947
• ZFINID: ZDB-GENE-030131-666
• Length: 427
• Species: Danio rerio
• Alignment Length: 404
• Identity: 161/404 - (39%)
• Similarity: 246/404 - (60%)
• Gaps: 20/404 - (4%)

  Fly    29 ELDMEDLYVRYKKLQKTLEFIEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVD- 92
            ::..|::..|.:.|...::.::.:...:..|.:.:|.:.....|::|..:::|.::...:|.:|
Zfish    23 KMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENTEKIKVNKTLPYLVSNVIELLDV 87

  Fly    93 ----------------QNTG---IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVL 138
                            |..|   ::.::|...|::.::..:|.|.|||...|.::|.|..:::.|
Zfish    88 DPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETL 152

  Fly   139 PPEADSSISMLQPDEKPDVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPP 203
            |.|.||.:..::.||:|...|:||||:|.|.||:.||:.||:.|.|.::.:||.||:||||||||
Zfish   153 PTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 217

  Fly   204 GCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATK 268
            |.|||:||:|.|..|.|:|:::.|.:.||.::|:|.::|||.|.||||.||:||||||:|||.||
Zfish   218 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 282

  Fly   269 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 333
            |||::...||||||.:||||||:|||.....||||.||||.|.|||||||.||||||||||:|:.
Zfish   283 RFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNE 347

  Fly   334 RQKRLVFSTITSKMNLSEDVDLEEFVARPDKISGADINAICQEAGMHAVRENRYIVLAKDFEKGY 398
            ..:..:....:.|||:..||:.||.....|..:||...|:|.||||.|:|.....:..:|:.:|.
Zfish   348 EARARIMQIHSRKMNVCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYMEGI 412

  Fly   399 KNNIKKDEQEHEFY 412
            .....|.:...::|
Zfish   413 LEVQAKKKANLQYY 426

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt3	NP_001285108.1	PTZ00454	22..413	CDD:240423	161/404 (40%)
		AAA	197..330	CDD:278434	87/132 (66%)
psmc3	XP_005169019.1	RPT1	12..420	CDD:224143	160/396 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1222
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.820