Protein Alignment Rpt3 and Rpt4

DIOPT Version :9

• Sequence 1: NP_001285108.1
• Gene: Rpt3 / 32047
• FlyBaseID: FBgn0028686
• Length: 413
• Species: Drosophila melanogaster
• Sequence 2: NP_572308.3
• Gene: Rpt4 / 31567
• FlyBaseID: FBgn0028685
• Length: 397
• Species: Drosophila melanogaster
• Alignment Length: 386
• Identity: 165/386 - (42%)
• Similarity: 246/386 - (63%)
• Gaps: 3/386 - (0%)

  Fly    28 DELDMEDLYVRYKKLQKTLEFIEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVD 92
            |.|.::.|....|||.:..| ||.:.:..::|.::|.|.|..::.::|.:|||..::|:.|:.:.
  Fly    10 DNLRVKALSEYRKKLLEHKE-IEGRLKEKREEIKDLTKLYDKSENDLKALQSVGQIVGEVLKQLT 73

  Fly    93 QNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQPDEKPDV 157
            ::..||.:|.|..|.|.....:|:..||....|||...:..::..||.|.|..:..:..::..||
  Fly    74 EDKFIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDV 138

  Fly   158 SYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASF 222
            :|:.|||:..|.:|:||.:||||.:.||:.::||.||:|.|:|||||.|||:||:|||....|:|
  Fly   139 TYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANF 203

  Fly   223 IRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLEL 287
            ::||.|..|.||:||..|::|::|..|:::.|.|||:||||||..:||...|.||||:||.|:||
  Fly   204 LKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMEL 268

  Fly   288 LNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSED 352
            ||||||||....||:||||||.||||||||||||||||||.|||:.:.:..:......|:....:
  Fly   269 LNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKHGE 333

  Fly   353 VDLEEFVARPDKISGADINAICQEAGMHAVRENRYIVLAKDFEKGYK--NNIKKDEQEHEF 411
            :|.|..|...|..:|||:..:|.|||:.|:|..|..|:.:||.|..:  ::.||.|.:.::
  Fly   334 IDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKVSDNKKLESKLDY 394

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt3	NP_001285108.1	PTZ00454	22..413	CDD:240423	165/386 (43%)
		AAA	197..330	CDD:278434	84/132 (64%)
Rpt4	NP_572308.3	RPT1	13..395	CDD:224143	163/383 (43%)
		AAA	179..311	CDD:278434	84/131 (64%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45445424
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1222
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23073
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	5	4.850