Protein Alignment Rpt3 and Psmc3

DIOPT Version :9

• Sequence 1: NP_001285108.1
• Gene: Rpt3 / 32047
• FlyBaseID: FBgn0028686
• Length: 413
• Species: Drosophila melanogaster
• Sequence 2: NP_113783.2
• Gene: Psmc3 / 29677
• RGDID: 61905
• Length: 442
• Species: Rattus norvegicus
• Alignment Length: 422
• Identity: 167/422 - (39%)
• Similarity: 254/422 - (60%)
• Gaps: 28/422 - (6%)

  Fly    11 EKDELSDLKLKDAHSSLDELDMEDLYVRYKKLQKTLEFIEVQEEYIKDEQRNLKKEYLHAQEEVK 75
            |:|.:.:..||        :..|::..|.:.|...::.::.:...:..|.:.:|.:.....|::|
  Rat    28 EQDGIGEEVLK--------MSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIK 84

  Fly    76 RIQSVPLVIGQFLEAVD-----------------QNTG---IVGSTTGSNYYVRILSTIDRELLK 120
            ..:::|.::...:|.:|                 |..|   ::.::|...|::.::..:|.|.||
  Rat    85 VNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLK 149

  Fly   121 PSASVALHKHSNALVDVLPPEADSSISMLQPDEKPDVSYADIGGMDMQKQEIREAVELPLTHFEL 185
            |...|.::|.|..:::.||.|.||.:..::.||:|...|:||||:|.|.||:.||:.||:.|.|.
  Rat   150 PGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEK 214

  Fly   186 YKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAK 250
            ::.:||.||:|||||||||.|||:||:|.|..|.|:|:::.|.:.||.::|:|.::|||.|.|||
  Rat   215 FENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAK 279

  Fly   251 ENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPA 315
            |.||:||||||:|||.|||||::...||||||.:||||||:|||...|.||||.||||.|.||||
  Rat   280 EKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPA 344

  Fly   316 LLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLEEFVARPDKISGADINAICQEAGMH 380
            |||.||||||||||:|:...:..:....:.|||:|.||:.||.....|..:||...|:|.||||.
  Rat   345 LLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMI 409

  Fly   381 AVRENRYIVLAKDFEKGYKNNIKKDEQEHEFY 412
            |:|.....:..:|:.:|......|.:...::|
  Rat   410 ALRRGATELTHEDYMEGILEVQAKKKANLQYY 441

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt3	NP_001285108.1	PTZ00454	22..413	CDD:240423	163/411 (40%)
		AAA	197..330	CDD:278434	88/132 (67%)
Psmc3	NP_113783.2	RPT1	28..435	CDD:224143	166/414 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1222
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820