Sequence 1: | NP_001285108.1 | Gene: | Rpt3 / 32047 | FlyBaseID: | FBgn0028686 | Length: | 413 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_032976.1 | Gene: | Psmc5 / 19184 | MGIID: | 105047 | Length: | 406 | Species: | Mus musculus |
Alignment Length: | 412 | Identity: | 174/412 - (42%) |
---|---|---|---|
Similarity: | 253/412 - (61%) | Gaps: | 31/412 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 PEKDELSDLKLKDAHSSLDELDMEDLYVRYKKLQKTLEFIEVQEEYIKDEQRNLKKEYLHAQ--- 71
Fly 72 ---------EEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVAL 127
Fly 128 HKHSNALVDVLPPEADSSISMLQPDEKPDVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGID 192
Fly 193 PPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAII 257
Fly 258 FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRL 322
Fly 323 DRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLEEFVARPDKISGADINAICQEAGMHAVRENRY 387
Fly 388 IVLAKDFEKGYKNNIKKDEQEH 409 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rpt3 | NP_001285108.1 | PTZ00454 | 22..413 | CDD:240423 | 169/400 (42%) |
AAA | 197..330 | CDD:278434 | 90/132 (68%) | ||
Psmc5 | NP_032976.1 | RPT1 | 4..404 | CDD:224143 | 174/412 (42%) |
May mediate interaction with PRPF9. /evidence=ECO:0000269|PubMed:17349974 | 186..406 | 115/213 (54%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D298123at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |