Protein Alignment Rpt3 and Psmc2

DIOPT Version :9

• Sequence 1: NP_001285108.1
• Gene: Rpt3 / 32047
• FlyBaseID: FBgn0028686
• Length: 413
• Species: Drosophila melanogaster
• Sequence 2: NP_001355590.1
• Gene: Psmc2 / 19181
• MGIID: 109555
• Length: 433
• Species: Mus musculus
• Alignment Length: 416
• Identity: 163/416 - (39%)
• Similarity: 229/416 - (55%)
• Gaps: 66/416 - (15%)

  Fly    54 EYIKDEQRNLKKEY-----LHAQEE--------------VKRIQSVPLVIGQFLEAVDQNTGIVG 99
            :|:..:||..|:|.     :.|.:|              .::|:.|...|.|.|:.:::.|||..
Mouse     3 DYLGADQRKTKEEEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKE 67

  Fly   100 STTG--------------------SNYYVRILSTIDRELLKPSASVALHKHSNALVDV------- 137
            |.||                    .....|....|:.:...|...:.:.:.:..:||:
Mouse    68 SDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT 132

  Fly   138 --------------------LPPEADSSISMLQPDEKPDVSYADIGGMDMQKQEIREAVELPLTH 182
                                |||:.|.:::|:|.:|||||:|:|:||...|.:::||.||.||.|
Mouse   133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLH 197

  Fly   183 FELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFR 247
            .|.:..:||:||:|||::||||.|||:.|:|||:.|.|.||||:|||.||||:|||.||||::|.
Mouse   198 PERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFE 262

  Fly   248 LAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTL 312
            :|:.....:||.||||||...|||...|.|.||||.:|||:||:||||...|:||:|||||.|||
Mouse   263 MARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTL 327

  Fly   313 DPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLEEFVARPDKISGADINAICQEA 377
            ||||:|||||||||||.|||...:..:|......|::..|:..|.........:||:|.::|.||
Mouse   328 DPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392

  Fly   378 GMHAVRENRYIVLAKDFEKGYKNNIK 403
            ||.|:|..|.|...|||.:.....||
Mouse   393 GMFAIRARRKIATEKDFLEAVNKVIK 418

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt3	NP_001285108.1	PTZ00454	22..413	CDD:240423	163/416 (39%)
		AAA	197..330	CDD:278434	87/132 (66%)
Psmc2	NP_001355590.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..21		5/17 (29%)
		RPT1	23..430	CDD:224143	158/396 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920