Protein Alignment Rpt3 and rpt-1

DIOPT Version :9

• Sequence 1: NP_001285108.1
• Gene: Rpt3 / 32047
• FlyBaseID: FBgn0028686
• Length: 413
• Species: Drosophila melanogaster
• Sequence 2: NP_506005.1
• Gene: rpt-1 / 179641
• WormBaseID: WBGene00004501
• Length: 435
• Species: Caenorhabditis elegans
• Alignment Length: 433
• Identity: 161/433 - (37%)
• Similarity: 221/433 - (51%)
• Gaps: 101/433 - (23%)

  Fly    54 EYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDREL 118
            :::.|:.|..||:  ..:||.|..|           |:|:....|....|...|...|.|:|.::
 Worm     3 DHLGDDMRKTKKD--DTKEEEKNFQ-----------ALDEGDIAVLKRYGQGPYAEQLKTLDADI 54

  Fly   119 -------------------LKPSA------------------------SVALHKH---------- 130
                               |.|.|                        .:...||
 Worm    55 ENCLKKVNELSGVKESDTGLAPPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINVKQ 119

  Fly   131 ----------SNALVDV------------------LPPEADSSISMLQPDEKPDVSYADIGGMDM 167
                      |.|..|:                  ||.:.|.:::|:|.:|||||:|:|:||...
 Worm   120 FAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKD 184

  Fly   168 QKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQ 232
            |.:::||.||.||.|.|.|..:||:||:|||:|||||.|||:.|:|||:.|.|.||||:|||.||
 Worm   185 QIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 249

  Fly   233 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQT 297
            ||:|||.||||::|.:|:.....:||.|||||:...|||...|.|.||||.:|||:||:||||..
 Worm   250 KYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPR 314

  Fly   298 TNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLEEFVARP 362
            .|:||:|||||.|||||||:||||||||:||.|||...:..:......:|::..|:..:......
 Worm   315 GNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLC 379

  Fly   363 DKISGADINAICQEAGMHAVRENRYIVLAKDF-------EKGY 398
            ...:||:|.::|.||||.|:|..|.:...|||       .|||
 Worm   380 PNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVVKGY 422

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt3	NP_001285108.1	PTZ00454	22..413	CDD:240423	161/433 (37%)
		AAA	197..330	CDD:278434	86/132 (65%)
rpt-1	NP_506005.1	RPT1	29..432	CDD:224143	151/394 (38%)
		AAA	214..345	CDD:278434	84/130 (65%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920