Protein Alignment Rpt3 and rpt-4

DIOPT Version :10

• Sequence 1: NP_572686.1
• Gene: Rpt3 / 32047
• FlyBaseID: FBgn0028686
• Length: 413
• Species: Drosophila melanogaster
• Sequence 2: NP_001022113.1
• Gene: rpt-4 / 173384
• WormBaseID: WBGene00004504
• Length: 406
• Species: Caenorhabditis elegans
• Alignment Length: 361
• Identity: 152/361 - (42%)
• Similarity: 233/361 - (64%)
• Gaps: 0/361 - (0%)

  Fly    39 YKKLQKTLEFIEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTG 103
            |::.......||.:.:.::.::..:.|::..::.::|.:|||..::|:.|:.:.:...||.:|.|
 Worm    29 YRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEKFIVKATNG 93

  Fly   104 SNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQPDEKPDVSYADIGGMDMQ 168
            ..|.|....:|::|.||....|:|...:..::..||.|.|..:..:..::..::||:|:||:..|
 Worm    94 PRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQ 158

  Fly   169 KQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQK 233
            .:|:||.|||||.:.||:|::||.||:|.|::||||.|||:||:|||.....:|::||.|..|.|
 Worm   159 IRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDK 223

  Fly   234 YLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTT 298
            |:||..||:|::|..|:::.|.|:|:||||||..:||...|.||||:||.|:|||||:||||...
 Worm   224 YIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLG 288

  Fly   299 NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLEEFVARPD 363
            .|||||||||.||||||||||||||||||..||:.:.:..:....::|:....::|.|..|...|
 Worm   289 KVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSD 353

  Fly   364 KISGADINAICQEAGMHAVRENRYIVLAKDFEKGYK 399
            ..|.||:..:|.||||.|:|..|..|:.:||.|..:
 Worm   354 GFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVR 389

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt3	NP_572686.1	PTZ00454	22..413	CDD:240423	152/361 (42%)
rpt-4	NP_001022113.1	PRK03992	21..391	CDD:179699	152/361 (42%)