DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt3 and LOC1273890

DIOPT Version :10

Sequence 1:NP_572686.1 Gene:Rpt3 / 32047 FlyBaseID:FBgn0028686 Length:413 Species:Drosophila melanogaster
Sequence 2:XP_312923.4 Gene:LOC1273890 / 1273890 -ID:- Length:438 Species:Anopheles gambiae


Alignment Length:377 Identity:191/377 - (50%)
Similarity:284/377 - (75%) Gaps:6/377 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 KLQKTLEFIEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV---PLVIGQFLEAVDQNTGIVGSTT 102
            ||::..:::.::||:|::::| ||.:....:||..::..:   |:.:|...|.:|.|..||.::.
Mosquito    62 KLERIKDYLLMEEEFIRNQER-LKPQEEKIEEERSKVDDLRGSPMSVGTLEEIIDDNHAIVSTSV 125

  Fly   103 GSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQPDEKPDVSYADIGGMDM 167
            ||.:||.|||.:|::.|:|..||.|:...:|:|.||..:.|..:::::.::.|..:||||||:|.
Mosquito   126 GSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVTVMKLEKAPQETYADIGGLDT 190

  Fly   168 QKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQ 232
            |.|||:|:|||||||.|.|:::||.||:||::|||||.|||:||||||:.|:|:|:||||||.:|
Mosquito   191 QIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQ 255

  Fly   233 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQT 297
            ||||:||::||::||:|:|:||:|:|||||||:.|||:|:.:|.:||:||.:||||||:||||..
Mosquito   256 KYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSR 320

  Fly   298 TNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLEEFVARP 362
            .:|||||||||.:||||||:||||:||||||||||.:.||.:|:..|::|.|:|||:|.|.:...
Mosquito   321 GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTARMTLAEDVNLSELIMAK 385

  Fly   363 DKISGADINAICQEAGMHAVRENRYIVLAKDFEKGYKNNI--KKDEQEHEFY 412
            |.:|||||.|||.|||:.|:||.|..|..:||:|..::.:  ||:......|
Mosquito   386 DDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKKEGTPEGLY 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt3NP_572686.1 PTZ00454 22..413 CDD:240423 191/377 (51%)
LOC1273890XP_312923.4 PTZ00361 1..438 CDD:185575 191/377 (51%)

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