DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60A and groL

DIOPT Version :10

Sequence 1:NP_511115.2 Gene:Hsp60A / 32045 FlyBaseID:FBgn0015245 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_418567.1 Gene:groL / 948665 ECOCYCID:EG10599 Length:548 Species:Escherichia coli


Alignment Length:551 Identity:294/551 - (53%)
Similarity:408/551 - (74%) Gaps:5/551 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 AKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIELKDKFQ 87
            ||||:||.:.|..||:||:||||||.||:|||||||::::|:|:|.||||||:||:.|||:|||:
E. coli     3 AKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFE 67

  Fly    88 NIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPVEIRRGVMLAVETVKDNLK 152
            |:||::|::||:..|:.||||||||||||:||..||.:.::.|.||::::||:..||....:.||
E. coli    68 NMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELK 132

  Fly   153 TMSRPVSTPEEIAQVATISANGDQAIGNLISEAMKKVGRDGVITVKDGKTLTDELEVIEGMKFDR 217
            .:|.|.|..:.||||.|||||.|:.:|.||:|||.|||::|||||:||..|.|||:|:|||:|||
E. coli   133 ALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDR 197

  Fly   218 GYISPYFINSSKGAKVEFQDALLLLSEKKISSVQSIIPALELANAQRKPLVIIAEDIDGEALSTL 282
            ||:||||||..:...||.:...:||::||||:::.::|.||......|||:|||||::||||:||
E. coli   198 GYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATL 262

  Fly   283 VVNRLKIGLQVAAVKAPGFGDNRKSTLTDMAIASGGIVFGDDADLVKLEDVKVSDLGQVGEVVIT 347
            |||.::..::|||||||||||.||:.|.|:|..:||.|..::..: :||...:.||||...|||.
E. coli   263 VVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGM-ELEKATLEDLGQAKRVVIN 326

  Fly   348 KDDTLLLKGKGKKDDVLRRANQIKDQIEDTTSEYEKEKLQERLARLASGVALLRVGGSSEVEVNE 412
            ||.|.::.|.|::..:..|..||:.|||:.||:|::||||||:|:||.|||:::||.::|||:.|
E. coli   327 KDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKE 391

  Fly   413 KKDRVHDALNATRAAVEEGIVPGGGTALLRCIEKLEGVETTNEDQKLGVEIVRRALRMPCMTIAK 477
            ||.||.|||:|||||||||:|.|||.||:|...||..:...||||.:|:::..||:..|...|..
E. coli   392 KKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVL 456

  Fly   478 NAGVDGAMVVAKVENQAGDYGYDALKGEYGNLIEKGIIDPTKVVRTAITDASGVASLLTTAEAVV 542
            |.|.:.::|...|:...|:|||:|...||||:|:.||:|||||.|:|:..|:.||.|:.|.|.:|
E. coli   457 NCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMV 521

  Fly   543 TEIPKEDGAPAMPGMGGMGGMGGMGGMGGMM 573
            |::||.|.|    .:|..|||||||||||||
E. coli   522 TDLPKNDAA----DLGAAGGMGGMGGMGGMM 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60ANP_511115.2 GroEL 24..544 CDD:239460 274/519 (53%)
groLNP_418567.1 groEL 2..530 CDD:234573 279/527 (53%)

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