DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60A and CCT4

DIOPT Version :9

Sequence 1:NP_511115.2 Gene:Hsp60A / 32045 FlyBaseID:FBgn0015245 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_010138.1 Gene:CCT4 / 851412 SGDID:S000002302 Length:528 Species:Saccharomyces cerevisiae


Alignment Length:553 Identity:129/553 - (23%)
Similarity:227/553 - (41%) Gaps:100/553 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 EVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIELKDKFQNIGAKLVQ 95
            |||...:.....:|||:..::||||.:.:|:.|.|...|:.||.|:.|.:.:....    |:::.
Yeast    19 EVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPV----ARMLV 79

  Fly    96 DVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPVEIRRGVMLAVETVKDNLKTMSRPVST 160
            :|:...:.|||||||:..:|..|:.......::||.:|..|......|.:...|.|..|...||.
Yeast    80 EVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSL 144

  Fly   161 PEEIAQVATISANGDQAIGNLISEAMKKVGRDGVITVKD-----------------GKTLTDELE 208
            .:....|...|.:....|.:..|..:..:..|.|:.:.|                 |.|: |:.|
Yeast   145 SDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTI-DDTE 208

  Fly   209 VIEGMKFDRGYI----SPYFINSSKGAKVEFQDALLLLSEKKISSVQSII-----PALELANAQR 264
            :|:|:...:..|    .|.....:|...::||     :|..|..:..:||     ...::...:|
Yeast   209 MIDGVVLTQTAIKSAGGPTRKEKAKIGLIQFQ-----ISPPKPDTENNIIVNDYRQMDKILKEER 268

  Fly   265 KPLVIIAEDIDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKSTLTDMAIASGGIVFGDDADLVK 329
            ..|:.|.:.|.....:.|::                    :||.|.| |:....:.|....:::.
Yeast   269 AYLLNICKKIKKAKCNVLLI--------------------QKSILRD-AVNDLALHFLSKLNIMV 312

  Fly   330 LEDVKVSDLGQVGEVVITKDDTLLLKGKGKK---------DDVLRRANQIKDQIEDTTSEYEKEK 385
            ::|::..::            ..|.||.|.|         :|.|..|:.:::...|.:.......
Yeast   313 VKDIEREEI------------EFLSKGLGCKPIADIELFTEDRLGSADLVEEIDSDGSKIVRVTG 365

  Fly   386 LQERLARLASGVALLRVGGSSEVEVNEKKDRVHDALNATRAAVEE-GIVPGGGTALLRCIEKL-- 447
            ::...||....|.   :.|::.:.::|.:..:||||...|..|:| |::.|||...:....:|  
Yeast   366 IRNNNARPTVSVV---IRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSK 427

  Fly   448 -----EGVETTNEDQKLGVEIVRRALRMPCMTIAKNAGVDGAMVV----AKVENQAGDYGYDALK 503
                 |||      |....:....||.:...|:|:|||::...||    :|.||...:.|....:
Yeast   428 EARSMEGV------QAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGISVRR 486

  Fly   504 GEYGNLIEKGIIDPTKVVRTAITDASG-VASLL 535
            ....|..|:.|:.|..|..:|||.||. |.|:|
Yeast   487 SGTTNTYEEHILQPVLVSTSAITLASECVKSIL 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60ANP_511115.2 PTZ00114 12..549 CDD:185455 129/553 (23%)
GroEL 24..544 CDD:239460 129/553 (23%)
CCT4NP_010138.1 chap_CCT_delta 11..528 CDD:274083 129/553 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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