DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60A and Cpn60beta4

DIOPT Version :9

Sequence 1:NP_511115.2 Gene:Hsp60A / 32045 FlyBaseID:FBgn0015245 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_173947.1 Gene:Cpn60beta4 / 839164 AraportID:AT1G26230 Length:611 Species:Arabidopsis thaliana


Alignment Length:569 Identity:240/569 - (42%)
Similarity:360/569 - (63%) Gaps:18/569 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PVSLARSSISRQLAMRGYAKDVRFGPE--VRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSP 67
            |.|.:.||.:..|.:|..||:|.|..:  |...:..|.|::|..:.||:|||||||:::..:|.|
plant    22 PSSSSSSSPNFVLRVRAAAKEVHFNRDGSVTKKLQAGADMVAKLLGVTLGPKGRNVVLQNKYGPP 86

  Fly    68 KITKDGVTVAKSIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAN 132
            :|..||.||.|.|||:|..:|:|.|||:.....||:.||||:||:.:||..:..||.:.||.|.|
plant    87 RIVNDGETVLKEIELEDPLENVGVKLVRQAGAKTNDLAGDGSTTSIILAHGLITEGIKVISAGTN 151

  Fly   133 PVEIRRGVMLAVETVKDNLKTMSRPVSTPEEIAQVATISANGDQAIGNLISEAMKKVGRDGVITV 197
            |:::.||:....:.:...||:|||.:. ..|:|.||.:||..|..:||:||.|.::|||.||:|:
plant   152 PIQVARGIEKTTKALVLELKSMSREIE-DHELAHVAAVSAGNDYEVGNMISNAFQQVGRTGVVTI 215

  Fly   198 KDGKTLTDELEVIEGMKFDRGYISPYFINSSKGAKVEFQDALLLLSEKKISSVQSIIPALELANA 262
            :.||.|.:.||::|||:|:|||:||||:...:..:.||.|..|||.:|||::.:.:...|:.|..
plant   216 EKGKYLVNNLEIVEGMQFNRGYLSPYFVTDRRKREAEFHDCKLLLVDKKITNPKDMFKILDSAVK 280

  Fly   263 QRKPLVIIAEDIDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKSTLTDMAIASGGIVFGDDADL 327
            :..|::|:||||:.:||:.::.|:||..|:|||:|||.||:.:...|.|:||.:|..|..|:..|
plant   281 EEFPVLIVAEDIEQDALAPVIRNKLKGNLKVAAIKAPAFGERKSHCLDDLAIFTGATVIRDEMGL 345

  Fly   328 VKLEDVKVSDLGQVGEVVITKDDTLLLKGKGKKDDVLRRANQIKDQIEDTTSEYEKEKLQERLAR 392
             .||......||....|::|||.||::.....:..|..|.:|||:.||:|...::|:.|.||:||
plant   346 -SLEKAGKEVLGTAKRVLVTKDSTLIVTNGFTQKAVDERVSQIKNLIENTEENFQKKILNERVAR 409

  Fly   393 LASGVALLRVGGSSEVEVNEKKDRVHDALNATRAAVEEGIVPGGGTALLRCIEKLEGVETT--NE 455
            |:.|:|:::||..::||:.:|:.:|.||||||::|:|||||.|||.||||...|::.::.|  |.
plant   410 LSGGIAIIQVGALTQVELKDKQLKVEDALNATKSAIEEGIVVGGGCALLRLATKVDRIKETLDNT 474

  Fly   456 DQKLGVEIVRRALRMPCMTIAKNAGVDGAMVVAKV-ENQAGDYGYDALKGEYGNLIEKGIIDPTK 519
            :||:|.||.::||..|...|||||..:|.:|:.|| .|:...|||:|.|.:|.:|:..|||||||
plant   475 EQKIGAEIFKKALSYPIRLIAKNADTNGNIVIEKVLSNKNTMYGYNAAKNQYEDLMLAGIIDPTK 539

  Fly   520 VVRTAITDASGVASLLTTAEAVVTEI-----------PKEDGAPAMPGM 557
            |||..:..||.||....|::.||.||           |....:||...|
plant   540 VVRCCLEHASSVAQTFLTSDCVVVEIKEIKPRPIINPPLPTSSPATSSM 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60ANP_511115.2 PTZ00114 12..549 CDD:185455 234/552 (42%)
GroEL 24..544 CDD:239460 227/524 (43%)
Cpn60beta4NP_173947.1 chaperonin_like 1..576 CDD:295468 236/555 (43%)
PTZ00114 35..570 CDD:185455 231/536 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D415781at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100393
Panther 1 1.100 - - O PTHR45633
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.780

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