DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60A and Cpn60beta3

DIOPT Version :9

Sequence 1:NP_511115.2 Gene:Hsp60A / 32045 FlyBaseID:FBgn0015245 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_001032083.1 Gene:Cpn60beta3 / 835751 AraportID:AT5G56500 Length:597 Species:Arabidopsis thaliana


Alignment Length:572 Identity:268/572 - (46%)
Similarity:379/572 - (66%) Gaps:19/572 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VSLARSSISR--QLAMRG-------YAKDVRFGPEVRAM--MLQGVDVLADAVAVTMGPKGRNVI 59
            ||::.||..|  .:|.|.       .||.:.|..:..|:  :..||:.|||.|.||:|||||||:
plant    26 VSISSSSFGRTQSIAQRKARFPKIYAAKQLHFNKDGTAIKKLQAGVNKLADLVGVTLGPKGRNVV 90

  Fly    60 IEQSWGSPKITKDGVTVAKSIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGF 124
            :|..:|||:|..||||||:.:||:|..:|||||||:..|:.||:.|||||||:.|||:.:..||.
plant    91 LESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGV 155

  Fly   125 EKISKGANPVEIRRGVMLAVETVKDNLKTMSRPVSTPEEIAQVATISANGDQAIGNLISEAMKKV 189
            :.::.|||||.|.||:....:.:...||.||:.|. ..|:|.||.:||..:..:||:|:|||.||
plant   156 KVVAAGANPVLITRGIEKTTKALVAELKKMSKEVE-DSELADVAAVSAGNNYEVGNMIAEAMAKV 219

  Fly   190 GRDGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINSSKGAKVEFQDALLLLSEKKISSVQSII 254
            ||.||:|:::||:..:.|.|:|||:||||||||||:..|:....|:::..|.|.:|||::.:.||
plant   220 GRKGVVTLEEGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMCAEYENCKLFLVDKKITNARDII 284

  Fly   255 PALELANAQRKPLVIIAEDIDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKSTLTDMAIASGGI 319
            ..||.|.....||:||||||:.|.|:|||||:|:..::|||:||||||:.:...|.|:|..:|..
plant   285 SILEDAIKGGYPLLIIAEDIEQEPLATLVVNKLRGTIKVAALKAPGFGERKSQYLDDIAALTGAT 349

  Fly   320 VFGDDADLVKLEDVKVSDLGQVGEVVITKDDTLLLKGKGKKDDVL-RRANQIKDQIEDTTSEYEK 383
            |..::..| :||.|....||..|:||:|||.|.:: |.|..::|: :|..|||:.||....:|||
plant   350 VIREEVGL-QLEKVGPEVLGNAGKVVLTKDTTTIV-GDGSTEEVVKKRVEQIKNLIEAAEQDYEK 412

  Fly   384 EKLQERLARLASGVALLRVGGSSEVEVNEKKDRVHDALNATRAAVEEGIVPGGGTALLRCIEKLE 448
            |||.||:|:|:.|||:::||..:|.|:.|||.||.||||||:||||||||.|||..|||...|::
plant   413 EKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVD 477

  Fly   449 GVETT--NEDQKLGVEIVRRALRMPCMTIAKNAGVDGAMVVAKV-ENQAGDYGYDALKGEYGNLI 510
            .::.|  |:::|:|.:||::||..|...|||||||:|::|..|| .:....:||:|..|:|.:|:
plant   478 AIKETLANDEEKVGADIVKKALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKHGYNAATGKYEDLM 542

  Fly   511 EKGIIDPTKVVRTAITDASGVASLLTTAEAVVTEIPK-EDGAPAMPGMGGMG 561
            ..||||||||||..:..||.||.....::.||.||.: |..|||...|...|
plant   543 AAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPESAAPAGNPMDNSG 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60ANP_511115.2 PTZ00114 12..549 CDD:185455 259/552 (47%)
GroEL 24..544 CDD:239460 252/525 (48%)
Cpn60beta3NP_001032083.1 PLN03167 1..597 CDD:215611 268/572 (47%)
groEL 51..597 CDD:237231 261/547 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D415781at2759
OrthoFinder 1 1.000 - - FOG0001450
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100393
Panther 1 1.100 - - O PTHR45633
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.780

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